MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-12598-P7a

Family name MIR-12598 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-12598-P1a  Ava-Mir-12598-P1b  Ava-Mir-12598-P2a  Ava-Mir-12598-P2b  Ava-Mir-12598-P3  Ava-Mir-12598-P4a  Ava-Mir-12598-P4b  Ava-Mir-12598-P5a  Ava-Mir-12598-P5b  Ava-Mir-12598-P6a  Ava-Mir-12598-P6b  Ava-Mir-12598-P7b 
Orthologues
Node of Origin (locus) A. vaga
Node of Origin (family) Rotifera
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075492.1: 12548345-12548405 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-12598-P7a)		 Novel-6-P2 CP075492.1: 12548112-12548173 [-] Ensembl
Mir-12598-P1b CP075492.1: 12548233-12548292 [-] Ensembl
Mir-12598-P7a CP075492.1: 12548345-12548405 [-] Ensembl
Mir-12598-P5b CP075492.1: 12548457-12548519 [-] Ensembl
Novel-2-P2 CP075492.1: 12548571-12548628 [-] Ensembl
Seed ACUGUUC
Precursor
(pre-Mir +30nt flank)		 
UUUUUUUAUUUUCUAGUCGUGUGUAUUAGCUACUGUUCUGCUGUGCCACGCUAUGCGAAAUGAAAGACAGCGAAGUACAGCAAACAGUUACUAAUGCCAUUUGUACGUGAACUUAUUUCCA
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Structure
        10           20        30        40        50        60
UUUUUUUAUUUUCUAGUC---|  U       CU      C        CA    AUGCGAA 
                     GUG GUAUUAG  ACUGUU UGCUGUGC  CGCU       A
                     UAC CGUAAUC  UGACAA ACGACAUG  GCGA       U
ACCUUUAUUCAAGUGCAUGUU^  -       AU      -        AA    CAGAAAG 
 .       110       100         90         80        70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
- +
To To
Mature sequence

Ava-Mir-12598-P7a_5p
mirBase accessionNone
Sequence 
0- UACUGUUCUGCUGUGCCACGCU -22
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Star sequence

Ava-Mir-12598-P7a_3p*
mirBase accessionNone
Sequence 
40- CGAAGUACAGCAAACAGUUAC -61
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