MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-12598-P7b

Family name MIR-12598 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-12598-P1a  Ava-Mir-12598-P1b  Ava-Mir-12598-P2a  Ava-Mir-12598-P2b  Ava-Mir-12598-P3  Ava-Mir-12598-P4a  Ava-Mir-12598-P4b  Ava-Mir-12598-P5a  Ava-Mir-12598-P5b  Ava-Mir-12598-P6a  Ava-Mir-12598-P6b  Ava-Mir-12598-P7a 
Orthologues
Node of Origin (locus) A. vaga
Node of Origin (family) Rotifera
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075497.1: 2491342-2491403 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-12598-P7b)		 Novel-2-P1 CP075497.1: 2491111-2491168 [+] Ensembl
Mir-12598-P5a CP075497.1: 2491217-2491279 [+] Ensembl
Mir-12598-P7b CP075497.1: 2491342-2491403 [+] Ensembl
Mir-12598-P1a CP075497.1: 2491467-2491526 [+] Ensembl
Novel-6-P1 CP075497.1: 2491586-2491648 [+] Ensembl
Seed ACUGUUC
Precursor
(pre-Mir +30nt flank)		 
UUUGUCAAACGUGUAUGAAUGUGUGUCAAAUACUGUUCUGCUUGUGCCGCGCUACGCAAAUUGAAAGUGAGCGAAGUACAACAGACAGUAAAUGACGCCAUCAGUAUCAACACUUAUUUUAG
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Structure
        10           20        30        40        50        60 
UUUGUCAAACGUGUAUGA---|  U      AA      U   C      CG    ACGCAAA 
                     AUG GUGUCA  UACUGU CUG UUGUGC  CGCU       U
                     UAC CGCAGU  AUGACA GAC AACAUG  GCGA       U
GAUUUUAUUCACAACUAUGAC^  -      AA      -   -      AA    GUGAAAG 
120       110       100         90          80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
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Mature sequence

Ava-Mir-12598-P7b_5p
mirBase accessionNone
Sequence 
0- UACUGUUCUGCUUGUGCCGCGCU -23
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Star sequence

Ava-Mir-12598-P7b_3p*
mirBase accessionNone
Sequence 
41- CGAAGUACAACAGACAGUAAA -62
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