MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-12598-P6b

Family name MIR-12598 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-12598-P1a  Ava-Mir-12598-P1b  Ava-Mir-12598-P2a  Ava-Mir-12598-P2b  Ava-Mir-12598-P3  Ava-Mir-12598-P4a  Ava-Mir-12598-P4b  Ava-Mir-12598-P5a  Ava-Mir-12598-P5b  Ava-Mir-12598-P6a  Ava-Mir-12598-P7a  Ava-Mir-12598-P7b 
Orthologues
Node of Origin (locus) A. vaga
Node of Origin (family) Rotifera
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075495.1: 1287663-1287753 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-12598-P6b)		 Mir-12598-P4a CP075495.1: 1287538-1287595 [+] Ensembl
Mir-12598-P6b CP075495.1: 1287663-1287753 [+] Ensembl
Mir-12598-P2a CP075495.1: 1287808-1287874 [+] Ensembl
Seed CACUGUU
Precursor
(pre-Mir +30nt flank)		 
UUCAUUAUUUCAAUUGGGAAAAUUGCGAUUACACUGUUCACACACCUCGCGCAGUGAUAAACUCUUUGUCUUAUUUUAGACAAAGAGGCGACAAGUCCGCCAGAUUGUGCGAACAGUCUAAUUGCUCAUUCCAAAUACCAUCAGAUAAAAA
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Structure
        10           20        30        40         50        60        70    
UUCAUUAUUUCAAUUGG---|  AAUU       C       A    C-  C   CAGUGAUAAACUCUUUGUCUUA 
                    GAA    GCGAUUA ACUGUUC CACA  CU GCG                      U
                    CUU    CGUUAAU UGACAAG GUGU  GA CGC                      U
AAAAAUAGACUACCAUAAAC^  ACU-       C       C    UA  C   CUGAACAGCGGAGAAACAGAUU 
 .       140       130        120       110       100        90        80
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To
Mature sequence

Ava-Mir-12598-P6b_5p
mirBase accessionNone
Sequence 
0- ACACUGUUCACACACCUCGCG -21
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Star sequence

Ava-Mir-12598-P6b_3p*
mirBase accessionNone
Sequence 
69- CCAGAUUGUGCGAACAGUCUAA -91
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