MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-12598-P4a

Family name MIR-12598 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-12598-P1a  Ava-Mir-12598-P1b  Ava-Mir-12598-P2a  Ava-Mir-12598-P2b  Ava-Mir-12598-P3  Ava-Mir-12598-P4b  Ava-Mir-12598-P5a  Ava-Mir-12598-P5b  Ava-Mir-12598-P6a  Ava-Mir-12598-P6b  Ava-Mir-12598-P7a  Ava-Mir-12598-P7b 
Orthologues
Node of Origin (locus) A. vaga
Node of Origin (family) Rotifera
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075495.1: 1287538-1287595 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-12598-P4a)		 Mir-12598-P4a CP075495.1: 1287538-1287595 [+] Ensembl
Mir-12598-P6b CP075495.1: 1287663-1287753 [+] Ensembl
Mir-12598-P2a CP075495.1: 1287808-1287874 [+] Ensembl
Seed ACUGUUC
Precursor
(pre-Mir +30nt flank)		 
GUAAGUUGAAAUCUAUUCUUAUUAUGAAGACACUGUUCGUCUUGCCUCGCUAGUGAAUCAAAUUAAGCGAAGCCUGUCGGCCAGUUCCUUCUAAUAAGAUCUUUUGAAUGUUUUCAUC
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Structure
        10           20        30        40        50        
GUAAGUUGAAAUCUAUU---|      U    AC    UU  UCUU  C     AGUGAA 
                    CUUAUUA GAAG  ACUG  CG    GC UCGCU      U
                    GAAUAAU CUUC  UGAC  GC    CG AGCGA      C
CUACUUUUGUAAGUUUUCUA^      -    CU    CG  UGUC  A     AUUAAA 
      110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To To
Mature sequence

Ava-Mir-12598-P4a_5p
mirBase accessionNone
Sequence 
0- CACUGUUCGUCUUGCCUCGCU -21
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Star sequence

Ava-Mir-12598-P4a_3p*
mirBase accessionNone
Sequence 
37- CGAAGCCUGUCGGCCAGUUCC -58
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