MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-12598-P4b

Family name MIR-12598 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-12598-P1a  Ava-Mir-12598-P1b  Ava-Mir-12598-P2a  Ava-Mir-12598-P2b  Ava-Mir-12598-P3  Ava-Mir-12598-P4a  Ava-Mir-12598-P5a  Ava-Mir-12598-P5b  Ava-Mir-12598-P6a  Ava-Mir-12598-P6b  Ava-Mir-12598-P7a  Ava-Mir-12598-P7b 
Orthologues
Node of Origin (locus) A. vaga
Node of Origin (family) Rotifera
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075494.1: 15756821-15756880 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-12598-P4b)		 Mir-12598-P2b CP075494.1: 15756552-15756629 [-] Ensembl
Mir-12598-P6a CP075494.1: 15756680-15756749 [-] Ensembl
Mir-12598-P4b CP075494.1: 15756821-15756880 [-] Ensembl
Seed ACUGUUC
Precursor
(pre-Mir +30nt flank)		 
AAGUCGAUGCAUUUCUUCUUAUACGGUAGACACUGUUCGUCUUGCCUCGCUCGAUGAUAAUCAAUGAAGCGAAGUUUGUCGAUCAGUACCCUCCGAUAAGAUUUUAUAUGCUUUCAUAUU
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Structure
        10           20        30         40        50         
AAGUCGAUGCAUUUCUU---|    A   U  AC-    U   UCUU  C     CGAUGAU 
                    CUUAU CGG AG   ACUG UCG    GC UCGCU       A
                    GAAUA GCC UC   UGAC AGC    UG AGCGA       A
UUAUACUUUCGUAUAUUUUA^    -   -  CCA    U   UGUU  A     AGUAACU 
.       110       100          90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To To
Mature sequence

Ava-Mir-12598-P4b_5p
mirBase accessionNone
Sequence 
0- CACUGUUCGUCUUGCCUCGCU -21
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Star sequence

Ava-Mir-12598-P4b_3p*
mirBase accessionNone
Sequence 
39- CGAAGUUUGUCGAUCAGUACC -60
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