Mir
Gene
DB
2.1
Home
Browse
Search
Download
Information
12 microRNA genes with seed CCAGUGU
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
▲
UG
UGUG
CNNC
Pma-Mir-199-o1
pma-mir-199a
MIR-199
CCAGUGU
MIMAT0019505
MIMAT0019506
NC_046090.1
4834920
4834980
+
P. marinus
Vertebrata
No
1
1
Ebu-Mir-338-P3
None
MIR-338
CCAGUGU
None
None
FYBX02010050.1
36039
36101
+
Cyclostomata
Vertebrata
No
1
Pma-Mir-338-P3
pma-mir-338b
MIR-338
CCAGUGU
None
MIMAT0019540
NC_046071.1
19740631
19740695
+
Cyclostomata
Vertebrata
No
Xtr-Mir-199-P3
xtr-mir-199b
MIR-199
CCAGUGU
MIMAT0003692
None
chr3
127964118
127964178
-
Gnathostomata
Vertebrata
No
1
Ebu-Mir-199-P5
None
MIR-199
CCAGUGU
None
None
FYBX02009869.1
649889
649949
+
E. burgeri
Vertebrata
No
1
1
Ebu-Mir-199-P6
None
MIR-199
CCAGUGU
None
None
FYBX02009521.1
561808
561868
+
E. burgeri
Vertebrata
No
1
Xla-Mir-199-P3a
None
MIR-199
CCAGUGU
None
None
NC_030728.1
132099453
132099513
-
X. laevis
Vertebrata
No
1
Xla-Mir-199-P3b
None
MIR-199
CCAGUGU
None
None
NW_016694811.1
452651
452711
-
X. laevis
Vertebrata
No
1
Loc-Mir-199-P1-v1
None
MIR-199
CCAGUGU
None
None
LG10
26292830
26292890
-
Gnathostomata
Vertebrata
No
1
Loc-Mir-199-P2-v1
None
MIR-199
CCAGUGU
None
None
LG21
12007937
12007997
-
Gnathostomata
Vertebrata
No
Loc-Mir-199-P3-v1
None
MIR-199
CCAGUGU
None
None
LG6
19340903
19340963
+
Gnathostomata
Vertebrata
No
1
Pma-Mir-199-o3
None
MIR-199
CCAGUGU
None
None
NC_046127.1
1016358
1016419
+
P. marinus
Vertebrata
Unknown
1
Download sequences for:
precursor
|
5p
|
3p
|
mature
|
star
|
mature/star
|
loop
|
extend_pre
|
all