MirGeneDB 3.0

19 microRNA genes with node of origin P. flava
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pfl-Mir-10-P3j1 None MIR-10 CCCUGAG None None LD348914.1 17512 17570 + P. flava Eumetazoa No 1 1
Pfl-Mir-10-P3j2 None MIR-10 CCCUGAG None None LD348914.1 17512 17570 + P. flava Eumetazoa No 1 1
Pfl-Mir-10-P3k None MIR-10 CAGGUUA None None LD350399.1 124091 124151 + P. flava Eumetazoa No 1 1
Pfl-Mir-92-o41 None MIR-92 AUUGCAC None None LD343282.1 96920 96979 + P. flava Bilateria No 1
Pfl-Mir-92-o42 None MIR-92 AUUGCAC None None LD343282.1 114848 114906 + P. flava Bilateria No 1 1
Pfl-Mir-92-o43 None MIR-92 AUUGCAC None None LD343282.1 115115 115177 + P. flava Bilateria No
Pfl-Mir-92-o44 None MIR-92 AUUGCAC None None LD343282.1 115395 115459 + P. flava Bilateria No 1 1
Pfl-Mir-92-o45 None MIR-92 AUUGCAC None None LD343282.1 115958 116021 + P. flava Bilateria No 1 1
Pfl-Mir-210-P25a None MIR-210 UGUGCGU None None LD347622.1 60060 60120 - P. flava Bilateria No 1
Pfl-Mir-210-P25b None MIR-210 UGUGCGU None None LD347622.1 60060 60120 - P. flava Bilateria No 1
Pfl-Mir-4825-P1a None MIR-4825 CACACCU None None LD342864.1 121309 121370 + P. flava Enteropneusta Yes 1
Pfl-Mir-4825-P1b None MIR-4825 CACACCU None None LD342864.1 121309 121370 + P. flava Enteropneusta Yes 1
Pfl-Mir-4830-P5 None MIR-4830 CUCUUGA None None LD353158.1 295072 295133 - P. flava Enteropneusta Unknown 1
Pfl-Mir-4830-P6 None MIR-4830 CUCUUGA None None LD353158.1 294064 294125 - P. flava Enteropneusta No
Pfl-Mir-4830-P7 None MIR-4830 CUCUUGA None None LD353158.1 289927 289988 - P. flava Enteropneusta Unknown 1 1
Pfl-Mir-4830-P8 None MIR-4830 CUCUUGA None None LD353158.1 289427 289486 - P. flava Enteropneusta No 1
Pfl-Novel-1 None PFL-NOVEL-1 UUCAUCU None None LD348073.1 223086 223149 - P. flava P. flava No
Pfl-Novel-2 None PFL-NOVEL-2 AUUGUGU None None LD353693.1 57013 57071 + P. flava P. flava No 1
Pfl-Novel-3 None PFL-NOVEL-3 CGUGUAA None None LD361500.1 8168 8234 - P. flava P. flava No 1 1

(red - mature/co-mature, blue - star)

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