MirGeneDB 3.0

19 microRNA genes with node of origin P. flava
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pfl-Mir-10-P3j1 None MIR-10 CCCUGAG None None LD348914.1 17512 17570 + P. flava Eumetazoa No 1 1
Pfl-Mir-10-P3j2 None MIR-10 CCCUGAG None None LD348914.1 17512 17570 + P. flava Eumetazoa No 1 1
Pfl-Mir-10-P3k None MIR-10 CAGGUUA None None LD350399.1 124091 124151 + P. flava Eumetazoa No 1 1
Pfl-Mir-92-o41 None MIR-92 AUUGCAC None None LD343282.1 96920 96979 + P. flava Bilateria No 1
Pfl-Mir-92-o42 None MIR-92 AUUGCAC None None LD343282.1 114848 114906 + P. flava Bilateria No 1 1
Pfl-Mir-92-o43 None MIR-92 AUUGCAC None None LD343282.1 115115 115177 + P. flava Bilateria No
Pfl-Mir-92-o44 None MIR-92 AUUGCAC None None LD343282.1 115395 115459 + P. flava Bilateria No 1 1
Pfl-Mir-92-o45 None MIR-92 AUUGCAC None None LD343282.1 115958 116021 + P. flava Bilateria No 1 1
Pfl-Mir-210-P25a None MIR-210 UGUGCGU None None LD347622.1 60060 60120 - P. flava Bilateria No 1
Pfl-Mir-210-P25b None MIR-210 UGUGCGU None None LD347622.1 60060 60120 - P. flava Bilateria No 1
Pfl-Mir-4825-P1a None MIR-4825 CACACCU None None LD342864.1 121309 121370 + P. flava Enteropneusta Yes 1
Pfl-Mir-4825-P1b None MIR-4825 CACACCU None None LD342864.1 121309 121370 + P. flava Enteropneusta Yes 1
Pfl-Mir-4830-P5 None MIR-4830 CUCUUGA None None LD353158.1 295072 295133 - P. flava Enteropneusta Unknown 1
Pfl-Mir-4830-P6 None MIR-4830 CUCUUGA None None LD353158.1 294064 294125 - P. flava Enteropneusta No
Pfl-Mir-4830-P7 None MIR-4830 CUCUUGA None None LD353158.1 289927 289988 - P. flava Enteropneusta Unknown 1 1
Pfl-Mir-4830-P8 None MIR-4830 CUCUUGA None None LD353158.1 289427 289486 - P. flava Enteropneusta No 1
Pfl-Novel-1 None PFL-NOVEL-1 UUCAUCU None None LD348073.1 223086 223149 - P. flava P. flava No
Pfl-Novel-2 None PFL-NOVEL-2 AUUGUGU None None LD353693.1 57013 57071 + P. flava P. flava No 1
Pfl-Novel-3 None PFL-NOVEL-3 CGUGUAA None None LD361500.1 8168 8234 - P. flava P. flava No 1 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all