MirGeneDB 3.0

40 microRNA genes with seed UCCAGUU
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Xla-Mir-145-P2 xla-mir-145 MIR-145 UCCAGUU MIMAT0046460 MIMAT0046461 NC_030729.1 104696294 104696353 + X. laevis Vertebrata No 1
Xla-Mir-145-P1 xla-mir-145 MIR-145 UCCAGUU MIMAT0046460 MIMAT0046461 NC_030728.1 33608579 33608638 - X. laevis Vertebrata No 1
Xtr-Mir-145 xtr-mir-145 MIR-145 UCCAGUU MIMAT0003688 None chr3 31807233 31807292 + Vertebrata Vertebrata Unknown 1
Tgu-Mir-145 None MIR-145 UCCAGUU None None 13 16706310 16706369 + Vertebrata Vertebrata No 1
Sto-Mir-145 None MIR-145 UCCAGUU None None BFAA01000077.1 1270660 1270719 + Vertebrata Vertebrata No 1
Spt-Mir-145 None MIR-145 UCCAGUU None None QEPC01015368.1 58297 58356 + Vertebrata Vertebrata Unknown 1
Sha-Mir-145 None MIR-145 UCCAGUU None None GL834622.1 419188 419247 - Vertebrata Vertebrata No 1
Rno-Mir-145 rno-mir-145 MIR-145 UCCAGUU MIMAT0000851 MIMAT0017131 chr18 56969920 56969979 - Vertebrata Vertebrata Yes 1
Pma-Mir-145 pma-mir-145 MIR-145 UCCAGUU MIMAT0019476 MIMAT0019477 NC_046089.1 6112208 6112266 + Vertebrata Vertebrata Unknown 1 1
Pbv-Mir-145 pbv-mir-145 MIR-145 UCCAGUU MIMAT0038959 MIMAT0038960 KE953037.1 158363 158422 - Vertebrata Vertebrata No 1
Pab-Mir-145 None MIR-145 UCCAGUU None None CM054683.2 158064130 158064189 + Vertebrata Vertebrata Yes 1
Ocu-Mir-145 ocu-mir-145 MIR-145 UCCAGUU MIMAT0048251 MIMAT0048252 chr3 31259937 31259996 + Vertebrata Vertebrata Yes 1
Oan-Mir-145 oan-mir-145 MIR-145 UCCAGUU MIMAT0007141 MIMAT0007142 NC_041749.1 16801834 16801893 + Vertebrata Vertebrata No 1
Neu-Mir-145 None MIR-145 UCCAGUU None None CM051813.1 409012083 409012142 - Vertebrata Vertebrata No 1
Mun-Mir-145 None MIR-145 UCCAGUU None None LR594639.1 181187272 181187331 + Vertebrata Vertebrata No 1
Mmu-Mir-145 mmu-mir-145a MIR-145 UCCAGUU MIMAT0000157 MIMAT0004534 chr18 61647829 61647888 - Vertebrata Vertebrata Yes 1
Mml-Mir-145 mml-mir-145 MIR-145 UCCAGUU MIMAT0002266 MIMAT0026568 CM014341.1 146942250 146942309 + Vertebrata Vertebrata Yes 1
Mdo-Mir-145 mdo-mir-145 MIR-145 UCCAGUU MIMAT0004116 MIMAT0026670 1 377173849 377173908 - Vertebrata Vertebrata No 1
Mal-Mir-145 None MIR-145 UCCAGUU None None KV884799.1 2793190 2793251 - Vertebrata Vertebrata No 1
Loc-Mir-145 None MIR-145 UCCAGUU None None LG6 37297028 37297087 + Vertebrata Vertebrata No 1
Lch-Mir-145 None MIR-145 UCCAGUU None None JH127531.1 332767 332826 + Vertebrata Vertebrata Unknown 1
Laf-Mir-145 None MIR-145 UCCAGUU None None GL010028.1 68861012 68861071 + Vertebrata Vertebrata Yes 1
Hsa-Mir-145 hsa-mir-145 MIR-145 UCCAGUU MIMAT0000437 MIMAT0004601 chr5 149430661 149430720 + Vertebrata Vertebrata Yes 1
Gmo-Mir-145 gmo-mir-145 MIR-145 UCCAGUU MIMAT0044334 MIMAT0044335 scaffold06411 3160 3221 - Vertebrata Vertebrata No 1 1
Gja-Mir-145 None MIR-145 UCCAGUU None None NW_015167063.1 395710 395769 - Vertebrata Vertebrata No 1
Gga-Mir-145 gga-mir-145 MIR-145 UCCAGUU MIMAT0037542 MIMAT0037543 13 9212133 9212192 - Vertebrata Vertebrata No 1
Ete-Mir-145 None MIR-145 UCCAGUU None None JH980294 39063870 39063929 + Vertebrata Vertebrata Yes 1
Eca-Mir-145 eca-mir-145 MIR-145 UCCAGUU MIMAT0013064 None CM009161.1 27742826 27742885 - Vertebrata Vertebrata Yes 1
Ebu-Mir-145 None MIR-145 UCCAGUU None None FYBX02000147.1 4053748 4053806 - Vertebrata Vertebrata Unknown 1 1
Dre-Mir-145 dre-mir-145 MIR-145 UCCAGUU MIMAT0001842 MIMAT0031976 chr14 38743970 38744030 + Vertebrata Vertebrata No 1
Dno-Mir-145 None MIR-145 UCCAGUU None None 572593378_name_G734P622317FC1_T0_mate_572586928 772 829 - Vertebrata Vertebrata Yes 1
Cpo-Mir-145 cpo-mir-145 MIR-145 UCCAGUU MIMAT0047014 MIMAT0047015 scaffold_6 11377829 11377888 + Vertebrata Vertebrata Yes 1
Cpi-Mir-145 cpi-mir-145 MIR-145 UCCAGUU MIMAT0037772 MIMAT0037773 JH584689 4712158 4712217 - Vertebrata Vertebrata No 1
Cmi-Mir-145 None MIR-145 UCCAGUU None None KI636010.1 208213 208272 - Vertebrata Vertebrata No 1
Cli-Mir-145 cli-mir-145 MIR-145 UCCAGUU MIMAT0038533 MIMAT0038534 scaffold395 918682 918741 + Vertebrata Vertebrata No
Cja-Mir-145 None MIR-145 UCCAGUU None None CM021916.1 46185918 46185977 + Vertebrata Vertebrata Yes 1
Cfa-Mir-145 cfa-mir-145 MIR-145 UCCAGUU MIMAT0009863 None chr4 59533141 59533200 - Vertebrata Vertebrata Yes 1
Bta-Mir-145 bta-mir-145 MIR-145 UCCAGUU MIMAT0003542 None NC_037334.1 60813565 60813624 + Vertebrata Vertebrata Yes 1
Ami-Mir-145 ami-mir-145 MIR-145 UCCAGUU MIMAT0038169 MIMAT0038170 NW_017713851.1 13478308 13478367 - Vertebrata Vertebrata No 1
Aca-Mir-145 aca-mir-145 MIR-145 UCCAGUU MIMAT0021773 MIMAT0021774 2 122657708 122657767 - Vertebrata Vertebrata No 1

(red - mature/co-mature, blue - star)

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