MirGeneDB 3.0

24 microRNA genes with seed CCCUGUA
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Hme-Mir-2756 hme-mir-2756 MIR-2756 CCCUGUA MIMAT0024953 None HE672079 296638 296695 + H. melpomene H. melpomene No 1
Bta-Mir-2367 bta-mir-2367 MIR-2367 CCCUGUA MIMAT0011909 MIMAT0011910 NC_037349.1 11368936 11368994 + B. taurus B. taurus No 1
Tur-Mir-10-P1z V tur-mir-10 MIR-10 CCCUGUA MIMAT0023026 MIMAT0023027 HE587320.1 1111621 1111681 + T. urticae Eumetazoa 2 No
Lpo-Mir-10-P1p V None MIR-10 CCCUGUA None None NW_013668868.1 9884 9943 - L. polyphemus Eumetazoa 2 No
Lpo-Mir-10-P1o V None MIR-10 CCCUGUA None None NW_013678333.1 8113 8170 + L. polyphemus Eumetazoa 2 No 1
Lpo-Mir-10-P1n V None MIR-10 CCCUGUA None None NW_013668646.1 77832 77889 - L. polyphemus Eumetazoa 2 No 1
Lpo-Mir-10-P1m V None MIR-10 CCCUGUA None None NW_013666465.1 260670 260726 - L. polyphemus Eumetazoa 2 No
Lpo-Mir-10-P1l V None MIR-10 CCCUGUA None None NW_013665747.1 245823 245879 - L. polyphemus Eumetazoa 2 No
Lpo-Mir-10-P1k V None MIR-10 CCCUGUA None None NW_013666572.1 345853 345911 + L. polyphemus Eumetazoa 2 No 1
Tca-Mir-10-P1 V tca-mir-10 MIR-10 CCCUGUA MIMAT0008357 MIMAT0019101 LG2 8460384 8460441 + Bilateria Eumetazoa 2 No 1
Isc-Mir-10-P1 V isc-mir-10 MIR-10 CCCUGUA MIMAT0012682 None NW_024609835.1 47870436 47870493 + Bilateria Eumetazoa 2 No 1
Hme-Mir-10-P1 V hme-mir-10 MIR-10 CCCUGUA MIMAT0024932 None HE667778 152725 152782 - Bilateria Eumetazoa 2 No 1
Dpu-Mir-10-P1 V dpu-mir-10 MIR-10 CCCUGUA MIMAT0012636 None DAPPUscaffold_7 304826 304884 - Bilateria Eumetazoa 2 No 1
Dma-Mir-10-P1 V None MIR-10 CCCUGUA None None NC_046178.1 8231923 8231981 + Bilateria Eumetazoa 2 No 1
Dlo-Mir-10-P1 V None MIR-10 CCCUGUA None None NC_087226.1 5567209 5567266 + Bilateria Eumetazoa 2 No 1
Bge-Mir-10-P1 V None MIR-10 CCCUGUA None None KZ614729.1 496542 496599 - Bilateria Eumetazoa 2 No 1
Aga-Mir-10-P1 V aga-mir-10 MIR-10 CCCUGUA MIMAT0001497 None NC_064601.1 57801554 57801615 - Bilateria Eumetazoa 2 No
Aae-Mir-10-P1 V aae-mir-10 MIR-10 CCCUGUA MIMAT0014277 None supercont1.440 813557 813619 + Bilateria Eumetazoa 2 No
Gpa-Mir-10-P1 None MIR-10 CCCUGUA None None JMRQ01006282 198124 198183 - Bilateria Eumetazoa No 1
Dya-Mir-10-P1 dya-mir-10 MIR-10 CCCUGUA MIMAT0009082 None 3R 7778013 7778075 + Bilateria Eumetazoa No 1
Dsi-Mir-10-P1 dsi-mir-10 MIR-10 CCCUGUA MIMAT0008887 None 3R 2529742 2529804 - Bilateria Eumetazoa No 1
Dmo-Mir-10-P1 dmo-mir-10 MIR-10 CCCUGUA MIMAT0008693 None scaffold_6540 16502920 16502982 + Bilateria Eumetazoa No 1
Dme-Mir-10-P1 dme-mir-10 MIR-10 CCCUGUA MIMAT0000115 MIMAT0012531 3R 6809512 6809574 - Bilateria Eumetazoa No 1
Dan-Mir-10-P1 dan-mir-10 MIR-10 CCCUGUA MIMAT0008476 None scaffold_13340 5417376 5417438 + Bilateria Eumetazoa No 1

(red - mature/co-mature, blue - star)

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