MirGeneDB ID | Bta-Mir-2367 |
Family name |
MIR-2367 (all species) |
Species |
Cow (Bos taurus) |
MiRBase ID |
bta-mir-2367
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
B. taurus
|
Node of Origin (family) |
B. taurus
|
Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037349.1: 11368936-11368994 [+]
UCSC
Ensembl
|
Seed |
CCCUGUA |
Precursor (pre-Mir +30nt flank) |
GUUUUACUGUUAAAUGUUUCUGUUUGGUACACCCUGUAACUCAGCCAUCAGAGUUUUAUGUAGAACUUUGAAAGGCACUUACAGGAAGCAUCAGGCAGUUCCUGUCCUCAGCCAGAGAC
Get precursor sequence
|
Structure | 10 20 30 40 50
GUUUUACUGUUAAAUGUUU--| ACAC CUCA A- UUUUA
CUGUUUGGU CCUGUAA GCC UCAGAG U
GACGGACUA GGACAUU CGG AGUUUC G
CAGAGACCGACUCCUGUCCUU^ CGAA CA-- AA AAGAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Mature sequence |
Bta-Mir-2367_5p |
mirBase accession | MIMAT0011909 |
Sequence |
0- ACCCUGUAACUCAGCCAUCAGAG -23
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-2367-5p
|
Star sequence |
Bta-Mir-2367_3p* |
mirBase accession | MIMAT0011910 |
Sequence |
37- UUGAAAGGCACUUACAGGAAGC -59
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-2367-3p
|