MirGeneDB 3.0

11 microRNA genes of family MIR-54

						Sort by genome coordinates								Motifs
MirGeneDB ID ▲	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	Iso­miR	3' NTU	UG	UGUG	CNNC
Asu-Mir-54-o1	asu-mir-56	MIR-54	ACCCGUA	None	MIMAT0021463	C4628901	434	493	+	A.suum	Chromadorea		No			1
Asu-Mir-54-o2	asu-mir-5358a	MIR-54	ACCCGUA	MIMAT0021578	MIMAT0021579	Scaffold882	8167	8228	+	A.suum	Chromadorea		No
Asu-Mir-54-o3	asu-mir-5358b	MIR-54	CAUGUUG	MIMAT0021598	MIMAT0021599	Scaffold882	12067	12126	+	A.suum	Chromadorea		No
Cel-Mir-54-P1	cel-mir-54	MIR-54	ACCCGUA	MIMAT0020773	MIMAT0000025	chrX	13145011	13145076	-	Caenorhabditis	Chromadorea		No
Cbr-Mir-54-P1a	cbr-mir-54a	MIR-54	ACCCGUA	MIMAT0011477	MIMAT0011478	X	16963777	16963838	-	C. briggsae	Chromadorea		No
Cbr-Mir-54-P1b V	cbr-mir-54b	MIR-54	CGAACCU	None	MIMAT0011494	X	16963615	16963679	-	C. briggsae	Chromadorea	2	No
Cbr-Mir-54-P1c	cbr-mir-54d	MIR-54	ACCCGUA	None	MIMAT0011496	X	16964087	16964152	-	C. briggsae	Chromadorea		No
Cbr-Mir-54-P2	cbr-mir-55	MIR-54	ACCCGUA	None	MIMAT0001310	X	16963478	16963540	-	Caenorhabditis	Chromadorea		No
Cel-Mir-54-P2	cel-mir-55	MIR-54	ACCCGUA	MIMAT0020313	MIMAT0000026	chrX	13144842	13144902	-	Caenorhabditis	Chromadorea		No
Cbr-Mir-54-P3	cbr-mir-56	MIR-54	ACCCGUA	MIMAT0011475	MIMAT0011476	X	16963349	16963415	-	Caenorhabditis	Chromadorea		No
Cel-Mir-54-P3	cel-mir-56	MIR-54	ACCCGUA	MIMAT0000027	MIMAT0000028	chrX	13144706	13144770	-	Caenorhabditis	Chromadorea		No

(red - mature/co-mature, blue - star)

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