MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7398-o8

Family name MIR-7398 (all species)
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7398-o5  Sha-Mir-7398-o6  Sha-Mir-7398-o7  Sha-Mir-7398-o9  Sha-Mir-7398-o13  Sha-Mir-7398-o14  Sha-Mir-7398-P5e  Sha-Mir-7398-P5f  Sha-Mir-7398-P9d-v1  Sha-Mir-7398-P9e-v1  Sha-Mir-7398-P21  Sha-Mir-7398-P24c-v1  Sha-Mir-7398-P24d-v1 
Orthologues
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867608.1: 2090858-2090916 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7398-o8)		 Mir-7398-P5e GL867608.1: 2079471-2079531 [+] UCSC Ensembl
Mir-7398-P5f GL867608.1: 2080041-2080101 [+] UCSC Ensembl
Mir-7398-P9d-v1 GL867608.1: 2081489-2081549 [+] UCSC Ensembl
Mir-7398-P9d-v2 GL867608.1: 2081490-2081548 [+] UCSC Ensembl
Mir-7398-P9e-v1 GL867608.1: 2082124-2082184 [+] UCSC Ensembl
Mir-7398-P9e-v2 GL867608.1: 2082125-2082183 [+] UCSC Ensembl
Mir-7398-o5 GL867608.1: 2084664-2084724 [+] UCSC Ensembl
Mir-7398-o6 GL867608.1: 2087632-2087690 [+] UCSC Ensembl
Mir-7398-o7 GL867608.1: 2088260-2088322 [+] UCSC Ensembl
Mir-7398-o8 GL867608.1: 2090858-2090916 [+] UCSC Ensembl
Mir-7398-o9 GL867608.1: 2092125-2092182 [+] UCSC Ensembl
Mir-7398-P21 GL867608.1: 2093388-2093443 [+] UCSC Ensembl
Mir-7398-P24c-v2 GL867608.1: 2099749-2099808 [+] UCSC Ensembl
Mir-7398-P24c-v1 GL867608.1: 2099749-2099808 [+] UCSC Ensembl
Mir-7398-P24d-v1 GL867608.1: 2102079-2102138 [+] UCSC Ensembl
Mir-7398-P24d-v2 GL867608.1: 2102079-2102138 [+] UCSC Ensembl
Mir-7398-o13 GL867608.1: 2103168-2103224 [+] UCSC Ensembl
Mir-7398-o14 GL867608.1: 2104962-2105021 [+] UCSC Ensembl
Seed GUUGAGA
Precursor
(pre-Mir +30nt flank)		 
CUCCUGUUCUUGCAACUCCAGGUGCCCGGUUGUUGAGAGGCAGGAAACAUGCCGUAUUUCCUCUGGGUAAGUUUCUUGCCUCUUACAAUUGAGCGCCUGUCCCCUGCCCAGGAGAGAGU
Get precursor sequence
Structure
        10          20        30        40        50         
CUCCUGUUCUUGCAACUC--|      C       U              A   CGUAUU 
                    CAGGUGC CGGUUGU GAGAGGCAGGAAAC UGC      U
                    GUCCGCG GUUAACA UUCUCCGUUCUUUG AUG      C
UGAGAGAGGACCCGUCCCCU^      A       -              A   GGUCUC 
       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-7398-o8_5p
mirBase accessionNone
Sequence 
0- UGUUGAGAGGCAGGAAACAUGC -22
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Co-mature sequence

Sha-Mir-7398-o8_3p
mirBase accessionNone
Sequence 
37- UAAGUUUCUUGCCUCUUACAAU -59
Get sequence