MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-217-P1

Family name MIR-217 (all species)
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-217a
Paralogues Pma-Mir-217-P2-v1 
Orthologues Bfl-Mir-217  Bla-Mir-217  Cmi-Mir-217  Ebu-Mir-217-P1-v1  Gmo-Mir-217  Laf-Mir-217  Lch-Mir-217  Loc-Mir-217  Mal-Mir-217  Mdo-Mir-217  Mmr-Mir-217  Spt-Mir-217  Tni-Mir-217 
Node of Origin (locus) Cyclostomata
Node of Origin (family) Chordata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046074.1: 1950981-1951039 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-217-P1)		 Mir-217-P1 NC_046074.1: 1950981-1951039 [-] UCSC Ensembl
Mir-216-P2b1 NC_046074.1: 1952348-1952411 [-] UCSC Ensembl
Mir-216-P2a1 NC_046074.1: 1955059-1955119 [-] UCSC Ensembl
Seed ACUGCAU
Precursor
(pre-Mir +30nt flank)		 
UAGAUCGGAGGUAUGUUUUGAUGUUGUGGAUACUGCAUCAGGAACUGAUUGGAUAGUGAUGGAUUGCCAUCAGUUCUUAAUGCAUUGUCUUCAGCAUCUAAACCAACAGCGUCAGCCAA
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Structure
        10          20        30        40        50         
UAGAUCGGAGGUAUGUUUU--|      U     C     C          U  AUAGUG 
                     GAUGUUG GGAUA UGCAU AGGAACUGAU GG      A
                     CUACGAC UCUGU ACGUA UUCUUGACUA CC      U
AACCGACUGCGACAACCAAAU^      U     U     A          -  GUUAGG 
       110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Mir-217-P1_5p
mirBase accessionMIMAT0019528
Sequence 
0- UACUGCAUCAGGAACUGAUUGGA -23
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Star sequence

Pma-Mir-217-P1_3p*
mirBase accessionNone
Sequence 
37- CAUCAGUUCUUAAUGCAUUGUC -59
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