MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-421-P1

Family name MIR-421 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-421-P2 
Orthologues Bta-Mir-421-P1-v1  Cfa-Mir-421-P1-v1  Cpo-Mir-421-P1  Dno-Mir-421-P1-v1  Eca-Mir-421-P1-v1  Hsa-Mir-421-P1-v1  Mml-Mir-421-P1-v1  Mmr-Mir-421-P1a  Mmr-Mir-421-P1b  Ocu-Mir-421-P1-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054702.2: 79203820-79203882 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-421-P1)		 Mir-421-P1 CM054702.2: 79203820-79203882 [-] UCSC Ensembl
Mir-374-P1 CM054702.2: 79203990-79204041 [-] UCSC Ensembl
Seed CUCAGUA
Precursor
(pre-Mir +30nt flank)		 
CUCCAGAGCCCAGCCUGGCACAUUAGUAGGCCUCAGUAAAUGUUUAUUAGAUGAAUAAAUGAAUGACUCAUCAGCAAACAUUUAUUGUGUGCCUGCUAAAGUGAGCUCCACAGGCUCUGGAUU
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Structure
        10          20        30         40        50        60 
CUCCAGAGCCCAGCCUGG--   A         CU-|           A  A    AAUAAAU 
                    CAC UUAGUAGGC   CAGUAAAUGUUU UU GAUG       \
                    GUG AAUCGUCCG   GUUAUUUACAAA GA CUAC       G
UUAGGUCUCGGACACCUCGA   A         UGU^           C  -    UCAGUAA 
 120       110       100        90        80         70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
Br Br Li Li
Mature sequence

Pab-Mir-421-P1_5p (predicted)
mirBase accessionNone
Sequence 
0- CCUCAGUAAAUGUUUAUUAGAUG -23
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Star sequence

Pab-Mir-421-P1_3p* (predicted)
mirBase accessionNone
Sequence 
40- UCAGCAAACAUUUAUUGUGUGCC -63
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