MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-7371-o31

Family name MIR-7371 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-7371-o29  Neu-Mir-7371-o30  Neu-Mir-7371-o32-v1  Neu-Mir-7371-o33  Neu-Mir-7371-P11  Neu-Mir-7371-P12a  Neu-Mir-7371-P12b  Neu-Mir-7371-P15  Neu-Mir-7371-P17  Neu-Mir-7371-P18  Neu-Mir-7371-P19-v1  Neu-Mir-7371-P20  Neu-Mir-7371-P24  Neu-Mir-7371-P25  Neu-Mir-7371-P28a  Neu-Mir-7371-P28b  Neu-Mir-7371-P29  Neu-Mir-7371-P39 
Orthologues Mdo-Mir-7371-P31 
Node of Origin (locus) N. eugenii
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051820.1: 69292321-69292381 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7371-o31-v1)		 Mir-7371-o29 CM051820.1: 69242583-69242643 [-] UCSC Ensembl
Mir-7371-o33 CM051820.1: 69271675-69271736 [-] UCSC Ensembl
Mir-7371-o32-v2 CM051820.1: 69280802-69280864 [-] UCSC Ensembl
Mir-7371-o32-v1 CM051820.1: 69280803-69280863 [-] UCSC Ensembl
Mir-7371-o31-v2 CM051820.1: 69292320-69292382 [-] UCSC Ensembl
Mir-7371-o31-v1 CM051820.1: 69292321-69292381 [-] UCSC Ensembl
Mir-7371-o30 CM051820.1: 69294479-69294539 [-] UCSC Ensembl
Variant

Neu-Mir-7371-o31-v1
Seed CUUUGUA
Precursor
(pre-Mir +30nt flank)		 
CUGGUCUCAGUCUCUUUCCUCCACUUACCCCCUUUGUAUCAGAGACUGUCUUGUAUAGAAGUCAUCAAAGACACUGUCUGGUACAAAGCAGGUGCUUGGGGUACCACAUUCACUUUUUGAA
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Structure
        10          20        30        40        50          
CUGGUCUCAGUCUCUUUC--|    CU    CC            GAC      GUAUAGA 
                    CUCCA  UACC  CUUUGUAUCAGA   UGUCUU       \
                    GGGGU  GUGG  GAAACAUGGUCU   ACAGAA       A
AAGUUUUUCACUUACACCAU^    UC    AC            GUC      ACUACUG 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-7371-o31-v1_5p
mirBase accessionNone
Sequence 
0- CCUUUGUAUCAGAGACUGUCUU -22
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Star sequence

Neu-Mir-7371-o31-v1_3p*
mirBase accessionNone
Sequence 
39- GACACUGUCUGGUACAAAGCAG -61
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Variant

Neu-Mir-7371-o31-v2
Seed CCUUUGU
Precursor
(pre-Mir +30nt flank)		 
GCUGGUCUCAGUCUCUUUCCUCCACUUACCCCCUUUGUAUCAGAGACUGUCUUGUAUAGAAGUCAUCAAAGACACUGUCUGGUACAAAGCAGGUGCUUGGGGUACCACAUUCACUUUUUGAAG
Get precursor sequence
Structure
        10          20        30        40        50        60 
GCUGGUCUCAGUCUCUUUC--|    CU    CC            GAC      GUAUAGA 
                     CUCCA  UACC  CUUUGUAUCAGA   UGUCUU       \
                     GGGGU  GUGG  GAAACAUGGUCU   ACAGAA       A
GAAGUUUUUCACUUACACCAU^    UC    AC            GUC      ACUACUG 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-7371-o31-v2_5p
mirBase accessionNone
Sequence 
0- CCCUUUGUAUCAGAGACUGUCUU -23
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Star sequence

Neu-Mir-7371-o31-v2_3p*
mirBase accessionNone
Sequence 
40- GACACUGUCUGGUACAAAGCAGG -63
Get sequence