MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-7371-P19

Family name MIR-7371 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-7371-o29  Neu-Mir-7371-o30  Neu-Mir-7371-o31-v1  Neu-Mir-7371-o32-v1  Neu-Mir-7371-o33  Neu-Mir-7371-P11  Neu-Mir-7371-P12a  Neu-Mir-7371-P12b  Neu-Mir-7371-P15  Neu-Mir-7371-P17  Neu-Mir-7371-P18  Neu-Mir-7371-P20  Neu-Mir-7371-P24  Neu-Mir-7371-P25  Neu-Mir-7371-P28a  Neu-Mir-7371-P28b  Neu-Mir-7371-P29  Neu-Mir-7371-P39 
Orthologues Mdo-Mir-7371-P19-v1  Sha-Mir-7371-o19  Sha-Mir-7371-P19-v1 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051820.1: 70679057-70679114 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7371-P19-v1)		 Mir-7371-P11 CM051820.1: 70668344-70668403 [+] UCSC Ensembl
Mir-7371-P12a CM051820.1: 70668674-70668729 [+] UCSC Ensembl
Mir-7371-P12b CM051820.1: 70671478-70671534 [+] UCSC Ensembl
Mir-7371-P15 CM051820.1: 70672905-70672960 [+] UCSC Ensembl
Mir-7371-P17 CM051820.1: 70675583-70675642 [+] UCSC Ensembl
Mir-7371-P18 CM051820.1: 70677002-70677059 [+] UCSC Ensembl
Mir-7371-P19-v2 CM051820.1: 70679056-70679115 [+] UCSC Ensembl
Mir-7371-P19-v1 CM051820.1: 70679057-70679114 [+] UCSC Ensembl
Mir-7371-P20 CM051820.1: 70679583-70679641 [+] UCSC Ensembl
Mir-7371-P24 CM051820.1: 70685882-70685939 [+] UCSC Ensembl
Mir-7371-P25 CM051820.1: 70689389-70689447 [+] UCSC Ensembl
Mir-7371-P28a CM051820.1: 70692408-70692467 [+] UCSC Ensembl
Mir-7371-P28b CM051820.1: 70692577-70692635 [+] UCSC Ensembl
Mir-7371-P29 CM051820.1: 70697155-70697212 [+] UCSC Ensembl
Mir-7371-P39 CM051820.1: 70713866-70713924 [+] UCSC Ensembl
Variant

Neu-Mir-7371-P19-v1
Seed AUAAGGA
Precursor
(pre-Mir +30nt flank)		 
UGUCCUACCAUUACCACCUCCAGCAGCCUCACUUGGAUAAAGUGCUUUAUUUUGUGAAUAGUGCUGAAAUAAGGACUUUAUCCAUGGAAGCUGUUGGCAAGGACCAUUCAGCCAAACC
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Structure
        10          20        30        40        50         
UGUCCUACCAUUACCACCU--|       C  ACU          G         GUGAA 
                     CCAGCAGC UC   UGGAUAAAGU CUUUAUUUU     U
                     GGUUGUCG AG   ACCUAUUUCA GGAAUAAAG     A
CCAAACCGACUUACCAGGAAC^       A  GU-          -         UCGUG 
      110       100        90         80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Star sequence

Neu-Mir-7371-P19-v1_5p*
mirBase accessionNone
Sequence 
0- ACUUGGAUAAAGUGCUUUAUUUU -23
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Mature sequence

Neu-Mir-7371-P19-v1_3p
mirBase accessionNone
Sequence 
37- AAUAAGGACUUUAUCCAUGGA -58
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Variant

Neu-Mir-7371-P19-v2
Seed ACUUGGA
Precursor
(pre-Mir +30nt flank)		 
UUGUCCUACCAUUACCACCUCCAGCAGCCUCACUUGGAUAAAGUGCUUUAUUUUGUGAAUAGUGCUGAAAUAAGGACUUUAUCCAUGGAAGCUGUUGGCAAGGACCAUUCAGCCAAACCA
Get precursor sequence
Structure
        10        20          30        40        50        60
UUGUCCUACCAUUACCACCU--|       C  ACU          G        UGUGAA 
                      CCAGCAGC UC   UGGAUAAAGU CUUUAUUU      U
                      GGUUGUCG AG   ACCUAUUUCA GGAAUAAA      A
ACCAAACCGACUUACCAGGAAC^       A  GU-          -        GUCGUG 
.       110       100        90         80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-7371-P19-v2_5p
mirBase accessionNone
Sequence 
0- CACUUGGAUAAAGUGCUUUAUUU -23
Get sequence
Star sequence

Neu-Mir-7371-P19-v2_3p*
mirBase accessionNone
Sequence 
39- AUAAGGACUUUAUCCAUGGAA -60
Get sequence