MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-7371-o30

Family name MIR-7371 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-7371-o29  Neu-Mir-7371-o31-v1  Neu-Mir-7371-o32-v1  Neu-Mir-7371-o33  Neu-Mir-7371-P11  Neu-Mir-7371-P12a  Neu-Mir-7371-P12b  Neu-Mir-7371-P15  Neu-Mir-7371-P17  Neu-Mir-7371-P18  Neu-Mir-7371-P19-v1  Neu-Mir-7371-P20  Neu-Mir-7371-P24  Neu-Mir-7371-P25  Neu-Mir-7371-P28a  Neu-Mir-7371-P28b  Neu-Mir-7371-P29  Neu-Mir-7371-P39 
Orthologues Mdo-Mir-7371-P30 
Node of Origin (locus) N. eugenii
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051820.1: 69294479-69294539 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7371-o30)
Mir-7371-o33 CM051820.1: 69271675-69271736 [-] UCSC Ensembl
Mir-7371-o32-v2 CM051820.1: 69280802-69280864 [-] UCSC Ensembl
Mir-7371-o32-v1 CM051820.1: 69280803-69280863 [-] UCSC Ensembl
Mir-7371-o31-v2 CM051820.1: 69292320-69292382 [-] UCSC Ensembl
Mir-7371-o31-v1 CM051820.1: 69292321-69292381 [-] UCSC Ensembl
Mir-7371-o30 CM051820.1: 69294479-69294539 [-] UCSC Ensembl
Seed CUUUGUA
Precursor
(pre-Mir +30nt flank)
AUGGUCUCAGUCUCUUUCCUCUACUUGCCCUCUUUGUAUCAGAGAUUGUCUUGUGUAGAUGUCAUCAAAGACACUGUCUGGUACAAAGGAGGUGUUUGGGGUACCACACUCUCUUUUUGAA
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Structure
        10          20        30        40        50          
AUGGUCUCAGUCUCUUUC--|    CU    CU            GAU     UGUGUAGA 
                    CUCUA  UGCC  CUUUGUAUCAGA   UGUCU        \
                    GGGGU  GUGG  GAAACAUGGUCU   ACAGA        U
AAGUUUUUCUCUCACACCAU^    UU    AG            GUC     AACUACUG 
 .       110       100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsUGUG in loop
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-7371-o30_5p

mirBase accessionNone
Sequence
0- UCUUUGUAUCAGAGAUUGUCU -21
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Star sequence

Neu-Mir-7371-o30_3p*

mirBase accessionNone
Sequence
40- ACACUGUCUGGUACAAAGGAG -61
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