Mir-7371-o29

MirGeneDB ID

Neu-Mir-7371-o29

Family name

Species

MiRBase ID

Paralogues

Neu-Mir-7371-o30 Neu-Mir-7371-o31-v1 Neu-Mir-7371-o32-v1 Neu-Mir-7371-o33 Neu-Mir-7371-P11 Neu-Mir-7371-P12a Neu-Mir-7371-P12b Neu-Mir-7371-P15 Neu-Mir-7371-P17 Neu-Mir-7371-P18 Neu-Mir-7371-P19-v1 Neu-Mir-7371-P20 Neu-Mir-7371-P24 Neu-Mir-7371-P25 Neu-Mir-7371-P28a Neu-Mir-7371-P28b Neu-Mir-7371-P29 Neu-Mir-7371-P39

Orthologues

Sha-Mir-7371-P29

Node of Origin (locus)

N. eugenii

Node of Origin (family)

Marsupialia

Genome context
(GCA_028372415.1_mMacEug1.pri)

CM051820.1: 69242583-69242643 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-7371-o29)

Mir-7370 CM051820.1: 69204543-69204601 [-] UCSC Ensembl
Mir-7371-o29 CM051820.1: 69242583-69242643 [-] UCSC Ensembl
Mir-7371-o33 CM051820.1: 69271675-69271736 [-] UCSC Ensembl
Mir-7371-o32-v2 CM051820.1: 69280802-69280864 [-] UCSC Ensembl
Mir-7371-o32-v1 CM051820.1: 69280803-69280863 [-] UCSC Ensembl
Mir-7371-o31-v2 CM051820.1: 69292320-69292382 [-] UCSC Ensembl
Mir-7371-o31-v1 CM051820.1: 69292321-69292381 [-] UCSC Ensembl

Seed

AGAGCAU

Precursor
(pre-Mir +30nt flank)

CACCACUAACACCAACUCCUCCACUUGCUUCGUUUGUACUAGAUGCACUUUUGUGUAAAUAUCAUCAAAUAGAGCAUUUUGUACAAAGGAAGUUUUUGGAGACAUAACACUCUACCUUGAG

Get precursor sequence

Structure

        10          20        30        40        50          
CACCACUAACACCAACUC--|    CUU     G       U      A  U  GUGUAAA 
                    CUCCA   GCUUC UUUGUAC AGAUGC CU UU       \
                    GAGGU   UGAAG AAACAUG UUUACG GA AA       U
GAGUUCCAUCUCACAAUACA^    UUU     G       U      A  U  ACUACUA 
 .       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Unknown

Motifs

UGUG in loop

Tissue expression

Br	Ce	Fi	Li	Mi	Mi	Mi	Mi	Mi	Ov	Se	Se	Te	Te	Te

Star sequence

Neu-Mir-7371-o29_5p* (predicted)

mirBase accession

None

Sequence

0- CGUUUGUACUAGAUGCACUUUU -22

Get sequence

Mature sequence

Neu-Mir-7371-o29_3p

mirBase accession

None

Sequence

39- UAGAGCAUUUUGUACAAAGGAA -61

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