Mir-7371-P29

MirGeneDB ID

Neu-Mir-7371-P29

Family name

Species

MiRBase ID

Paralogues

Neu-Mir-7371-o29 Neu-Mir-7371-o30 Neu-Mir-7371-o31-v1 Neu-Mir-7371-o32-v1 Neu-Mir-7371-o33 Neu-Mir-7371-P11 Neu-Mir-7371-P12a Neu-Mir-7371-P12b Neu-Mir-7371-P15 Neu-Mir-7371-P17 Neu-Mir-7371-P18 Neu-Mir-7371-P19-v1 Neu-Mir-7371-P20 Neu-Mir-7371-P24 Neu-Mir-7371-P25 Neu-Mir-7371-P28a Neu-Mir-7371-P28b Neu-Mir-7371-P39

Orthologues

Sha-Mir-7371-P29

Node of Origin (locus)

Australidelphia

Node of Origin (family)

Marsupialia

Genome context
(GCA_028372415.1_mMacEug1.pri)

CM051820.1: 70697155-70697212 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-7371-P29)

Mir-7371-P11 CM051820.1: 70668344-70668403 [+] UCSC Ensembl
Mir-7371-P12a CM051820.1: 70668674-70668729 [+] UCSC Ensembl
Mir-7371-P12b CM051820.1: 70671478-70671534 [+] UCSC Ensembl
Mir-7371-P15 CM051820.1: 70672905-70672960 [+] UCSC Ensembl
Mir-7371-P17 CM051820.1: 70675583-70675642 [+] UCSC Ensembl
Mir-7371-P18 CM051820.1: 70677002-70677059 [+] UCSC Ensembl
Mir-7371-P19-v2 CM051820.1: 70679056-70679115 [+] UCSC Ensembl
Mir-7371-P19-v1 CM051820.1: 70679057-70679114 [+] UCSC Ensembl
Mir-7371-P20 CM051820.1: 70679583-70679641 [+] UCSC Ensembl
Mir-7371-P24 CM051820.1: 70685882-70685939 [+] UCSC Ensembl
Mir-7371-P25 CM051820.1: 70689389-70689447 [+] UCSC Ensembl
Mir-7371-P28a CM051820.1: 70692408-70692467 [+] UCSC Ensembl
Mir-7371-P28b CM051820.1: 70692577-70692635 [+] UCSC Ensembl
Mir-7371-P29 CM051820.1: 70697155-70697212 [+] UCSC Ensembl
Mir-7371-P39 CM051820.1: 70713866-70713924 [+] UCSC Ensembl

Seed

UAUGGAC

Precursor
(pre-Mir +30nt flank)

UACCCUGCCUCCAUCAUUUUCACCUGCCUCUUAUGGACAAAAUGCUCUCCUUUGUGAAUUAAAUCAAAACGAGCUUCUUGUCCAUAGGGGCUGUUGGCAAAUAACGCCACAGACUAAC

Get precursor sequence

Structure

        10          20        30        40        50         
UACCCUGCCUCCAUCAUUU--|  CCU   U           AAU    UCC    UGAA 
                     UCA   GCC CUUAUGGACAA   GCUC   UUUG    U
                     GGU   CGG GGAUACCUGUU   CGAG   AAAC    U
CAAUCAGACACCGCAAUAAAC^  UGU   -           CUU    CA-    UAAA 
      110       100        90         80        70         60

Deep sequencing

Go to detailed chart

3' NTU

Yes

Motifs

CNNC at 3p(+17)

Tissue expression

Br	Ce	Fi	Li	Mi	Mi	Mi	Mi	Mi	Ov	Se	Se	Te	Te	Te

Mature sequence

Neu-Mir-7371-P29_5p

mirBase accession

None

Sequence

0- UUAUGGACAAAAUGCUCUCCUUUG -24

Get sequence

Co-mature sequence

Neu-Mir-7371-P29_3p

mirBase accession

None

Sequence

36- AAACGAGCUUCUUGUCCAUAGG -58

Get sequence