MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-296

Family name MIR-296 (all species)
Seed GGGCCCC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-296
Paralogues
Orthologues Bta-Mir-296  Cfa-Mir-296  Cpo-Mir-296  Dno-Mir-296  Hsa-Mir-296  Mml-Mir-296  Rno-Mir-296 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chr2: 174267058-174267113 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-296)		 Mir-296 chr2: 174267058-174267113 [-] UCSC Ensembl
Mir-298 chr2: 174267511-174267575 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUGGAAGGUGACAAGAGGGCCUUUCUGGAGGGCCCCCCCUCAAUCCUGUUGUGCUCGCUUCAGAGGGUUGGGUGGAGGCUCUCCUGAAGGUGUCCGCAGAGCGUCGCAUGGUAA
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Structure
        10         20         30        40        50       
AUGUGGAAGGUGACAAGA-    -|    U        C  C         GUUGUGC 
                   GGGC CUUUC GGAGGGCC CC CUCAAUCCU       U
                   CCUG GGAAG CCUCUCGG GG GGGUUGGGA       C
AAUGGUACGCUGCGAGACG    U^    U        A  U         GACUUCG 
    110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-296_5p
mirBase accessionMIMAT0000374
Sequence 
0- AGGGCCCCCCCUCAAUCCUGU -21
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Proposed targets microrna.org: MIMAT0000374
TargetScanVert: mmu-miR-296-5p
miRDB: MIMAT0000374
Star sequence

Mmu-Mir-296_3p*
mirBase accessionMIMAT0004576
Sequence 
35- AGGGUUGGGUGGAGGCUCUCC -56
Get sequence
Proposed targets microrna.org: MIMAT0004576
TargetScanVert: mmu-miR-296-3p
miRDB: MIMAT0004576