MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-296

Family name MIR-296 (all species)
Seed GGGUUGG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-296
Paralogues
Orthologues Bta-Mir-296  Cfa-Mir-296  Cpo-Mir-296  Hsa-Mir-296  Mml-Mir-296  Mmu-Mir-296  Rno-Mir-296 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH568283: 2444403-2444457 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGAUGACGAUGAAGAGAAGGACCCUUCCGGAGGGCCCCCCUCAACCCUGUUGUGCUUGAUUCAGAGGGUUGGGUGGAGGCUUUCCUGAAGGGCUCUGAGAAGUCGCUGCCUCUGG
Get precursor sequence
Structure
        10          20        30         40        50      
AGAUGACGAUGAAGAGA--  GA      C        C  -|        GUUGUGC 
                   AG  CCCUUC GGAGGGCC CC CUCAACCCU       U
                   UC  GGGAAG CCUUUCGG GG GGGUUGGGA       U
GGUCUCCGUCGCUGAAGAG  UC      U        A  U^        GACUUAG 
   110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUGUG in loop
Tissue expression
 +
To
Star sequence

Dno-Mir-296_5p* (predicted)

mirBase accessionMIMAT0047783
Sequence
0- AGGGCCCCCCUCAACCCUGU -20
Get sequence
Mature sequence

Dno-Mir-296_3p

mirBase accessionMIMAT0047784
Sequence
34- AGGGUUGGGUGGAGGCUUUCC -55
Get sequence