MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-298

Family name MIR-298 (all species)
Seed GCAGAGG
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-298
Paralogues
Orthologues Rno-Mir-298 
Node of Origin (locus) Muridae
Node of Origin (family) Muridae
Genome context
(mm10)		 chr2: 174267511-174267575 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-298)		 Mir-296 chr2: 174267058-174267113 [-] UCSC Ensembl
Mir-298 chr2: 174267511-174267575 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACCAAGAGGCAUAAGAGGCCCAGGCCUUUGGCAGAGGAGGGCUGUUCUUCCCUUGAGUUUUAUGACUGGGAGGAACUAGCCUUCUCUCAGCUUAGGAGUGGGCCAACAGCUUCCUUCCGAUCUC
Get precursor sequence
Structure
        10           20        30         40         50        60 
CACCAAGAGGCAUAAGA---      GG   UU   A   -       -|        UUGAGUU 
                    GGCCCA  CCU  GGC GAG GAGGGCU GUUCUUCCC       \
                    CCGGGU  GGA  UCG CUC CUUCCGA CAAGGAGGG       U
CUCUAGCCUUCCUUCGACAA      GA   U-   A   U       U^        UCAGUAU 
   120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-298_5p
mirBase accessionMIMAT0000376
Sequence 
0- GGCAGAGGAGGGCUGUUCUUCCC -23
Get sequence
Proposed targets microrna.org: MIMAT0000376
TargetScanVert: mmu-miR-298-5p
miRDB: MIMAT0000376
Star sequence

Mmu-Mir-298_3p*
mirBase accessionMIMAT0017007
Sequence 
40- GAGGAACUAGCCUUCUCUCAGCUUA -65
Get sequence
Proposed targets TargetScanVert: mmu-miR-298-3p
miRDB: MIMAT0017007