MirGeneDB 3.0

MirGeneDB ID

Mal-Mir-725

Family name MIR-725 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues Cmi-Mir-725  Cpi-Mir-725  Dre-Mir-725  Gmo-Mir-725  Lch-Mir-725  Loc-Mir-725  Sto-Mir-725  Tni-Mir-725  Xla-Mir-725-P1  Xla-Mir-725-P2  Xtr-Mir-725 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884719.1: 3843059-3843119 [-] UCSC Ensembl
Seed UCAGUCA
Precursor
(pre-Mir +30nt flank)
GAAUCCCUUCACAACAGCUGUUACCCGCACAGCUAGAAACUUUGCCUGGGAAUUUCUGUGCUUAAAAAUUUCAGUCAUUGUUUCUGGUCGCGUGUGUAAUGUGGAAUCAAGACAAAACAGG
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Structure
        10          20        30        40        50          
GAAUCCCUUCACAACAGCU--|    C   ACA         UU  C     AAUUUCUGU 
                     GUUAC CGC   GCUAGAAAC  UG CUGGG         \
                     UAAUG GUG   UGGUCUUUG  AC GACUU         G
GGACAAAACAGAACUAAGGUG^    U   CGC         UU  U     UAAAAAUUC 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-725_5p*

mirBase accessionNone
Sequence
0- AGCUAGAAACUUUGCCUGGGAA -22
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Mature sequence

Mal-Mir-725_3p

mirBase accessionNone
Sequence
39- UUCAGUCAUUGUUUCUGGUCGC -61
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