MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-725

Family name MIR-725 (all species)
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-725
Paralogues
Orthologues Cmi-Mir-725  Cpi-Mir-725  Dre-Mir-725  Lch-Mir-725  Loc-Mir-725  Mal-Mir-725  Sto-Mir-725  Tni-Mir-725  Xla-Mir-725-P1  Xla-Mir-725-P2  Xtr-Mir-725 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 GeneScaffold_1908: 57443-57503 [-] UCSC Ensembl
Seed UCAGUCA
Precursor
(pre-Mir +30nt flank)		 
CUUCCUUUCUGACUUUAUUGUUGCCCAUACAGCUGGAAACUUUGCCUGCAAAUUUAAGAGUUCAUGAAUUUCAGUCAUUGUUUCUGGUAGUGUGUGCAACAACUCAAGCUCCCAAAGAGUU
Get precursor sequence
Structure
        10          20        30        40        50        60
CUUCCUUUCUGACUUUA--|      C     A  UG     UU  C   C    UUAAGA 
                   UUGUUGC CAUAC GC  GAAAC  UG CUG AAAU      G
                   AACAACG GUGUG UG  CUUUG  AC GAC UUUA      U
UUGAGAAACCCUCGAACUC^      U     A  GU     UU  U   -    AGUACU 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Gi He In Li Sk Sp Wh
Star sequence

Gmo-Mir-725_5p*
mirBase accessionMIMAT0044159
Sequence 
0- AGCUGGAAACUUUGCCUGCAAAU -23
Get sequence
Mature sequence

Gmo-Mir-725_3p
mirBase accessionMIMAT0044160
Sequence 
39- UUCAGUCAUUGUUUCUGGUAGU -61
Get sequence