| MirGeneDB ID | Loc-Mir-205-P1 |
|---|---|
| Family name | MIR-205 (all species) |
| Species | Spotted gar (Lepisosteus oculatus) |
| MiRBase ID | |
| Paralogues | Loc-Mir-205-P4 Loc-Mir-205-P4-as |
| Orthologues | Cmi-Mir-205-P1 Lch-Mir-205-P1 Mal-Mir-205-P1-v1 Pma-Mir-205-o1 Sto-Mir-205-P1 Xla-Mir-205-P1a Xla-Mir-205-P1b Xtr-Mir-205-P1 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (LepOcu1) |
|
| Seed | UUCCCAG |
| Precursor (pre-Mir +30nt flank) |
UCCUUCAUUCCACCGGAUCCUGUUCCCUGACUGCAGAUUCCCAGUGGGAUGAGGCACAGet precursor sequence |
| Structure | 10 20 UC-- C-| UC UCCC CUUCAUUCCAC GGA CUGU \ GGAGUAGGGUG CCU GACG U ACAC AC^ UA UCAG 50 40 30 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Loc-Mir-205-P1_5p* |
| mirBase accession | None |
| Sequence |
0- UCCUUCAUUCCACCGGAUCCU -21
Get sequence
|
| Mature sequence | Loc-Mir-205-P1_3p |
| mirBase accession | None |
| Sequence |
36- AUUCCCAGUGGGAUGAGGCACA -58
Get sequence
|
