| MirGeneDB ID | Isc-Mir-76 |
|---|
| Family name |
MIR-76 (all species) |
|---|
| Species |
Deer tick (Ixodes scapularis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aae-Mir-76
Aga-Mir-76
Agr-Mir-76
Asu-Mir-76
Ava-Mir-76-P11
Ava-Mir-76-P12
Bge-Mir-76
Bko-Mir-76
Bpl-Mir-76
Cbr-Mir-76
Cel-Mir-76
Csc-Mir-76-P10a
Csc-Mir-76-P10b
Cte-Mir-76
Dan-Mir-76
Dgr-Mir-76
Dlo-Mir-76
Dma-Mir-76
Dme-Mir-76
Dmo-Mir-76
Dpu-Mir-76
Dsi-Mir-76
Dya-Mir-76
Eba-Mir-76
Efe-Mir-76
Esc-Mir-76
Gpa-Mir-76
Gsa-Mir-76
Hme-Mir-76
Hru-Mir-76
Lan-Mir-76-P1
Lan-Mir-76-P2
Lgi-Mir-76
Llo-Mir-76
Lpo-Mir-76-P3
Lpo-Mir-76-P4
Lpo-Mir-76-P5
Lpo-Mir-76-P6
Lpo-Mir-76-P7
Lpo-Mir-76-P8
Mgi-Mir-76
Mom-Mir-76
Npo-Mir-76
Obi-Mir-76
Ofu-Mir-76
Ovu-Mir-76
Pau-Mir-76
Pcr-Mir-76
Pdu-Mir-76
Pmi-Mir-76
Pve-Mir-76
Rph-Mir-76
Sma-Mir-76
Sme-Mir-76-P9a
Sme-Mir-76-P9b
Snu-Mir-76
Spu-Mir-76
Tca-Mir-76
Tur-Mir-76
War-Mir-76
|
|---|
| Node of Origin (locus) |
Nephrozoa
|
|---|
| Node of Origin (family) |
Nephrozoa
|
|---|
Genome context
(GCF_016920785.2_ASM1692078v2_ISC) |
NW_024609839.1: 80457596-80457676 [-]
Ensembl
|
|---|
| Seed |
UCGUUGU |
|---|
Precursor
(pre-Mir +30nt flank) |
AACAAAGAUAAGAUAUUCCGCCACGCCUGUCAGGUCUCUCGACCAACGACCAGAGUCUCUGGAAAGGAUGACCGGGAACCGGUCAACUGUUCGUUGUCGUAGAAACCUGAUAGGAGUGCGUCGGGUUCUCGUCGGCGUGGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AACAAAGAUAAGAUAUUC - - G C -| C C GAGUCUCUGGAAAGGAU
CG C CAC CCUGUCAGGU UCU CGAC AACGA CA \
GC G GUG GGAUAGUCCA AGA GCUG UUGCU GU G
UGGUGCGGCUGCUCUUGG U C A A U^ - U CAACUGGCCAAGGGCCA
. 130 120 110 100 90 80 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Sa |
Sa |
To |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Isc-Mir-76_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CAGGUCUCUCGACCAACGACCA -22
Get sequence
|
|---|
| Mature sequence |
Isc-Mir-76_3p |
| mirBase accession | None |
|---|
| Sequence |
59- UUCGUUGUCGUAGAAACCUGAU -81
Get sequence
|
|---|
