Mir-76

MirGeneDB ID

Cel-Mir-76

Family name

MIR-76 (all species)

Species

Roundworm (Caenorhabditis elegans)

MiRBase ID

cel-mir-76

Paralogues

Orthologues

Aae-Mir-76 Aga-Mir-76 Agr-Mir-76 Asu-Mir-76 Ava-Mir-76-P11 Ava-Mir-76-P12 Bge-Mir-76 Bko-Mir-76 Bpl-Mir-76 Cbr-Mir-76 Csc-Mir-76-P10a Csc-Mir-76-P10b Cte-Mir-76 Dan-Mir-76 Dgr-Mir-76 Dlo-Mir-76 Dma-Mir-76 Dme-Mir-76 Dmo-Mir-76 Dpu-Mir-76 Dsi-Mir-76 Dya-Mir-76 Eba-Mir-76 Efe-Mir-76 Esc-Mir-76 Gpa-Mir-76 Gsa-Mir-76 Hme-Mir-76 Hru-Mir-76 Isc-Mir-76 Lan-Mir-76-P1 Lan-Mir-76-P2 Lgi-Mir-76 Llo-Mir-76 Lpo-Mir-76-P3 Lpo-Mir-76-P4 Lpo-Mir-76-P5 Lpo-Mir-76-P6 Lpo-Mir-76-P7 Lpo-Mir-76-P8 Mgi-Mir-76 Mom-Mir-76 Npo-Mir-76 Obi-Mir-76 Ofu-Mir-76 Ovu-Mir-76 Pau-Mir-76 Pcr-Mir-76 Pdu-Mir-76 Pmi-Mir-76 Pve-Mir-76 Rph-Mir-76 Sma-Mir-76 Sme-Mir-76-P9a Sme-Mir-76-P9b Snu-Mir-76 Spu-Mir-76 Tca-Mir-76 Tur-Mir-76 War-Mir-76

Node of Origin (locus)

Nephrozoa

Node of Origin (family)

Nephrozoa

Genome context
(ce11)

chrIII: 3142060-3142126 [+] UCSC Ensembl

Seed

UCGUUGU

Precursor
(pre-Mir +30nt flank)

CUCAGGUAAGAUAAAAUUUCAGCUCCUGUCUGGGCUUCACAAUAGUCGAAUACCUUAAAUUUCAAAAUUUGGAUAUUCGUUGUUGAUGAAGCCUUGAUGGGGGUGAGAAAGAAGUUUGCUUAGCUCA

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Structure

        10         20         30         40        50        60   
CUCAGGUAAGAUAAAAU-   A-         U        -|     U      CCUUAAAUUU 
                  UUC  GCUCCUGUC GGGCUUCA CAAUAG CGAAUA          \
                  AAG  UGGGGGUAG UCCGAAGU GUUGUU GCUUAU          C
ACUCGAUUCGUUUGAAGA   AG         U        A^     -      AGGUUUAAAA 
     120       110       100        90        80         70

Deep sequencing

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3' NTU

Motifs

Tissue expression

Da	Ea	Mi	Wi	Yo	Yo

Star sequence

Cel-Mir-76_5p*

mirBase accession

MIMAT0020321

Sequence

0- UGGGCUUCACAAUAGUCGAAUA -22

Get sequence

Mature sequence

Cel-Mir-76_3p

mirBase accession

MIMAT0000048

Sequence

45- UUCGUUGUUGAUGAAGCCUUGA -67

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Proposed targets

microrna.org: MIMAT0000048
TargetScanWorm: cel-miR-76