Mir-1323

MirGeneDB ID

Hsa-Mir-1323

Family name

MIR-1323 (all species)

Seed

CAAAACU

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-1323

Paralogues

Orthologues

Mml-Mir-1323

Node of Origin (locus)

Catarrhini

Node of Origin (family)

Catarrhini

Genome context
(hg38)

chr19: 53671978-53672033 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-1323)

Mir-430-P8b chr19: 53666693-53666750 [+] UCSC Ensembl
Mir-430-P8a chr19: 53669177-53669234 [+] UCSC Ensembl
Mir-1323 chr19: 53671978-53672033 [+] UCSC Ensembl
Mir-498 chr19: 53674230-53674289 [+] UCSC Ensembl
Mir-430-P25 chr19: 53675725-53675785 [+] UCSC Ensembl
Mir-430-P9b chr19: 53679016-53679074 [+] UCSC Ensembl
Mir-430-P20 chr19: 53679953-53680011 [+] UCSC Ensembl
Mir-430-P26 chr19: 53682173-53682233 [+] UCSC Ensembl
Mir-430-P9a chr19: 53685022-53685080 [+] UCSC Ensembl
Mir-430-P18 chr19: 53686484-53686543 [+] UCSC Ensembl
Mir-430-P49 chr19: 53688495-53688553 [+] UCSC Ensembl
Mir-430-P21 chr19: 53690895-53690953 [+] UCSC Ensembl
Mir-430-P47 chr19: 53694406-53694464 [+] UCSC Ensembl
Mir-430-P17 chr19: 53695225-53695284 [+] UCSC Ensembl
Mir-430-P44 chr19: 53697547-53697605 [+] UCSC Ensembl
Mir-430-P42 chr19: 53698400-53698458 [+] UCSC Ensembl
Mir-430-P14 chr19: 53700030-53700088 [+] UCSC Ensembl
Mir-430-P22 chr19: 53701228-53701288 [+] UCSC Ensembl
Mir-430-P10 chr19: 53702750-53702808 [+] UCSC Ensembl
Mir-430-P45 chr19: 53706266-53706324 [+] UCSC Ensembl
Mir-430-P23 chr19: 53707468-53707527 [+] UCSC Ensembl
Mir-430-P11 chr19: 53708759-53708817 [+] UCSC Ensembl
Mir-430-P43 chr19: 53711017-53711075 [+] UCSC Ensembl
Mir-430-P35a chr19: 53712282-53712342 [+] UCSC Ensembl
Mir-430-P19 chr19: 53713361-53713422 [+] UCSC Ensembl
Mir-430-P29b chr19: 53716608-53716668 [+] UCSC Ensembl
Mir-430-P24 chr19: 53720111-53720170 [+] UCSC Ensembl
Mir-430-P35b chr19: 53721081-53721139 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AAGUCAGACAUGACAUUCAGACUGAGGUCCUCAAAACUGAGGGGCAUUUUCUGUGGUUUGAAAGGAAAGUGCACCCAGUUUUGGGGAUGUCAAUUGUGAAUCCUCAUCAUAACCCA

Get precursor sequence

Structure

        10        20          30        40        50        
AAGUCAGACAUGACAUUCAGAC--|  G             A  G         GUGGU 
                        UGA GUCCUCAAAACUG GG GCAUUUUCU     \
                        ACU UAGGGGUUUUGAC CC CGUGAAAGG     U
ACCCAAUACUACUCCUAAGUGUUA^  G             -  A         AAAGU 
    110       100        90        80         70        60

Deep sequencing

Go to detailed chart

3' NTU

Unknown

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Mature sequence

Hsa-Mir-1323_5p

mirBase accession

MIMAT0005795

Sequence

0- UCAAAACUGAGGGGCAUUUUCU -22

Get sequence

Proposed targets

microrna.org: MIMAT0005795
TargetScanVert: hsa-miR-1323
TargetMiner: hsa-miR-1323
miRDB: MIMAT0005795

Star sequence

Hsa-Mir-1323_3p*

mirBase accession

None

Sequence

35- AAAGUGCACCCAGUUUUGGGG -56

Get sequence