MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-876

Family name MIR-876 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-876-v1  Cfa-Mir-876-v1  Cja-Mir-876-v1  Cpo-Mir-876-v1  Dno-Mir-876-v1  Eca-Mir-876-v1  Hsa-Mir-876-v1  Laf-Mir-876-v1  Mml-Mir-876-v1  Mmr-Mir-876  Ocu-Mir-876-v1  Pab-Mir-876-v1  Rno-Mir-876-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980356: 5665041-5665099 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-876)		 Mir-876 JH980356: 5665041-5665099 [-] UCSC
Mir-873-v1 JH980356: 5691864-5691922 [-] UCSC
Mir-873-v2 JH980356: 5691865-5691921 [-] UCSC
Seed GGUGGUU
Precursor
(pre-Mir +30nt flank)		 
UUACCAAGCUUAUGACUGUGAAGUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUAAGCUAAUGUGGUGGUGGUUUUCAAAGUAAUUCACAUUGCUUCACAGAUGCUUCUAUAGGUGAA
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Structure
        10          20        30        40        50         
UUACCAAGCUUAUGACU--|      GC        U     U          AUCUAAG 
                   GUGAAGU  UGUGGAUU CUUUG GAAUCACCAU       \
                   CACUUCG  ACACUUAA GAAAC UUUGGUGGUG       C
AAGUGGAUAUCUUCGUAGA^      UU        U     U          GUGUAAU 
       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Ete-Mir-876_5p* (predicted)
mirBase accessionNone
Sequence 
0- GAUUUCUUUGUGAAUCACCAUA -22
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Mature sequence

Ete-Mir-876_3p (predicted)
mirBase accessionNone
Sequence 
37- UGGUGGUUUUCAAAGUAAUUCA -59
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