| MirGeneDB ID | Ete-Mir-136-v1 |
|---|
| Family name |
MIR-136 (all species) |
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| Seed |
AUCAUCG |
|---|
| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
|
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| Paralogues |
Ete-Mir-136-v2
|
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| Orthologues |
Bta-Mir-136-v1
Cfa-Mir-136-v1
Cpo-Mir-136-v1
Dno-Mir-136-v1
Hsa-Mir-136-v1
Mml-Mir-136-v1
Mmu-Mir-136-v1
Ocu-Mir-136-v1
Rno-Mir-136-v1
|
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| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
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Genome context
(echTel2) |
JH980297: 82397135-82397190 [-]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
CCGCGGCGGUAUUGGAUGAGCCCUCGGAGGACUCCAUUUGUUUUGAUGAUGGAUUCUUAUGCUCCAUCAUCGUCUCAAAUGAGUCUUCAGAGGGUUCUAUCAUUUCUUCGGUUGGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCGCGGCGGUAUUGGAU--| G C UUU UUCU
GAGCCCUC GAGGACUC AUUUG UGAUGAUGGA \
CUUGGGAG CUUCUGAG UAAAC GCUACUACCU U
AGGUUGGCUUCUUUACUAU^ A - UCU CGUA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
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Tissue expression
|
|
|---|
| Star sequence |
Ete-Mir-136-v1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACUCCAUUUGUUUUGAUGAUGGA -23
Get sequence
|
|---|
| Mature sequence |
Ete-Mir-136-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
34- CAUCAUCGUCUCAAAUGAGUCU -56
Get sequence
|
|---|
