MirGeneDB 2.1
MirGeneDB ID

Ebu-Mir-219-P6

Family name MIR-219 (all species)
Seed GAUUGUC
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-219-P5 
Orthologues Aae-Mir-219  Bfl-Mir-219  Bge-Mir-219  Bla-Mir-219  Cgi-Mir-219  Cin-Mir-219  Csc-Mir-219  Cte-Mir-219  Dan-Mir-219  Dma-Mir-219  Dme-Mir-219  Dmo-Mir-219  Dpu-Mir-219  Dsi-Mir-219  Dya-Mir-219  Esc-Mir-219  Isc-Mir-219  Lan-Mir-219  Obi-Mir-219  Ovu-Mir-219  Pfl-Mir-219  Pmi-Mir-219  Sko-Mir-219  Spu-Mir-219  Tca-Mir-219  Xbo-Mir-219 
Node of Origin (locus) E. burgeri
Node of Origin (family) Bilateria
Genome context
(Eburgeri_3)		 FYBX02009657.1: 6260596-6260664 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUACGAUCCGGACACCGAGCCCUCGCUGUUGAUUGUCCAAACGCAAUUCUUGCGCUGCUUCCUCCUGCGACAUCCAAGGGUUGCGUGUGGACAUCUGCAGCGGGGGCUUUGGAGCAGCAACACGAGGA
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Structure
        10          20        30        40        50        60    
UCUACGAUCCGGACACC--|            U   U     A            CGCUGCUUCC 
                   GAGCCCUCGCUGU GAU GUCCA ACGCAAUUCUUG          U
                   UUCGGGGGCGACG CUA CAGGU UGCGUUGGGAAC          C
AGGAGCACAACGACGAGGU^            U   -     G            CUACAGCGUC 
       120       110       100         90        80        70
Deep sequencing
CommentThe MIR-219 family shows substantial variation of arm-usage and is currently, across all species, considered a co-mature.
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-219-P6_5p (predicted)
mirBase accessionNone
Sequence 
0- UGAUUGUCCAAACGCAAUUCUUG -23
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Co-mature sequence

Ebu-Mir-219-P6_3p (predicted)
mirBase accessionNone
Sequence 
47- AGGGUUGCGUGUGGACAUCUGC -69
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