Mir-450-P2

MirGeneDB ID

Dno-Mir-450-P2

Family name

MIR-450 (all species)

Species

Nine-banded armadillo (Dasypus novemcinctus)

MiRBase ID

dno-mir-450a

Paralogues

Dno-Mir-450-P1 Dno-Mir-450-P3

Orthologues

Bta-Mir-450-P2 Cfa-Mir-450-P2 Cja-Mir-450-P2 Cpo-Mir-450-P2 Eca-Mir-450-P2 Hsa-Mir-450-P2 Laf-Mir-450-P2 Mml-Mir-450-P2 Mmr-Mir-450-P2 Mmu-Mir-450-P2 Ocu-Mir-450-P2 Pab-Mir-450-P2 Rno-Mir-450-P2a Rno-Mir-450-P2b

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(dasNov3)

JH573198: 468989-469045 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-450-P2)

Mir-15-P1c JH573198: 462451-462509 [+] UCSC Ensembl
Mir-15-P2c JH573198: 462819-462881 [+] UCSC Ensembl
Mir-542-v1 JH573198: 468016-468075 [+] UCSC Ensembl
Mir-542-v2 JH573198: 468017-468074 [+] UCSC Ensembl
Mir-450-P1 JH573198: 468836-468892 [+] UCSC Ensembl
Mir-450-P2 JH573198: 468989-469045 [+] UCSC Ensembl
Mir-450-P3 JH573198: 469158-469215 [+] UCSC Ensembl

Seed

UUUGCGA

Precursor
(pre-Mir +30nt flank)

CAUUAUAGGCAAAGAAAGAUGCUAAACUAUUUUUGCGAUGUGUUCCUAAUAUGCAGUAUAAAUAUAUUGGGAACAUUUUGCAUAUGUAGUUUUGUAUCAAUAUACAGACCAAAGGCU

Get precursor sequence

Structure

        10          20        30        40        50        
CAUUAUAGGCAAAGAAA--|    U       UUU     U             GCAGU 
                   GAUGC AAACUAU   UGCGA GUGUUCCUAAUAU     \
                   CUAUG UUUGAUG   ACGUU UACAAGGGUUAUA     A
UCGGAAACCAGACAUAUAA^    U       UAU     U             UAAAU 
     110       100        90        80        70        60