MirGeneDB 3.0

MirGeneDB ID

Mmu-Mir-450-P2

Family name MIR-450 (all species)
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-450a-1
Paralogues Mmu-Mir-450-P1  Mmu-Mir-450-P3 
Orthologues Bta-Mir-450-P2  Cfa-Mir-450-P2  Cja-Mir-450-P2  Cpo-Mir-450-P2  Dno-Mir-450-P2  Eca-Mir-450-P2  Hsa-Mir-450-P2  Laf-Mir-450-P2  Mml-Mir-450-P2  Mmr-Mir-450-P2  Ocu-Mir-450-P2  Pab-Mir-450-P2  Rno-Mir-450-P2a  Rno-Mir-450-P2b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chrX: 53048171-53048227 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P2)
Mir-450-P3 chrX: 53048008-53048065 [-] UCSC Ensembl
Mir-450-P2 chrX: 53048171-53048227 [-] UCSC Ensembl
Mir-450-P1 chrX: 53048304-53048360 [-] UCSC Ensembl
Mir-542 chrX: 53049414-53049474 [-] UCSC Ensembl
Mir-351 chrX: 53053276-53053338 [-] UCSC Ensembl
Mir-15-P2c chrX: 53053987-53054049 [-] UCSC Ensembl
Mir-15-P1c-v3 chrX: 53054268-53054329 [-] UCSC Ensembl
Mir-15-P1c-v2 chrX: 53054269-53054328 [-] UCSC Ensembl
Mir-15-P1c-v1 chrX: 53054270-53054327 [-] UCSC Ensembl
Seed UUUGCGA
Precursor
(pre-Mir +30nt flank)
ACCAGUGACCAAAGAGAGAUACUGAGCUGUUUUUGCGAUGUGUUCCUAAUAUGUGCUAUAAUUAUAUUGGGAACAUUUUGCAUAAAUAGCUUUGUGUCAAUACACAGGCAAAAGGUU
Get precursor sequence
Structure
        10          20        30        40        50        
ACCAGUGACCAAAGAGA--|    U         U     U             GUGCU 
                   GAUAC GAGCUGUUU UGCGA GUGUUCCUAAUAU     \
                   CUGUG UUCGAUAAA ACGUU UACAAGGGUUAUA     A
UUGGAAAACGGACACAUAA^    U         U     U             UUAAU 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-450-P2_5p

mirBase accessionMIMAT0001546
Sequence
0- UUUUGCGAUGUGUUCCUAAUAU -22
Get sequence
Proposed targets microrna.org: MIMAT0001546
TargetScanVert: mmu-miR-450a-5p
miRDB: MIMAT0001546
Star sequence

Mmu-Mir-450-P2_3p*

mirBase accessionMIMAT0017182
Sequence
35- AUUGGGAACAUUUUGCAUAAAU -57
Get sequence
Proposed targets TargetScanVert: mmu-miR-450a-1-3p
miRDB: MIMAT0017182