MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-448

Family name MIR-448 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-448  Cfa-Mir-448  Cpo-Mir-448  Eca-Mir-448  Ete-Mir-448  Hsa-Mir-448  Laf-Mir-448  Mml-Mir-448  Mmr-Mir-448  Mmu-Mir-448  Ocu-Mir-448  Pab-Mir-448  Rno-Mir-448 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021937.1: 107095147-107095225 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-448)		 Mir-1911 CM021937.1: 107045408-107045466 [+] UCSC Ensembl
Mir-448 CM021937.1: 107095147-107095225 [+] UCSC Ensembl
Seed UGCAUAU
Precursor
(pre-Mir +30nt flank)		 
CAGUUCACCUUCACAUGGGCGGGGAGGUUGAACAUCCUGCAUAGUGCUGCCAGGAAAUCCCUAUUUCAUACUAAGAGGGGGCUGGCUGGUUGCAUAUGUAGGAUGUCCCAUCUCCCAGCCCACUUCGUCAUGACAGAUA
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Structure
        10          20        30        40        50        60         
CAGUUCACCUUCACAUG--|  G       UGA            G   U   AGGAAAUCCCUAUUUCA 
                   GGC GGGAGGU   ACAUCCUGCAUA UGC GCC                 U
                   CCG CCCUCUA   UGUAGGAUGUAU ACG UGG                 A
AUAGACAGUACUGCUUCAC^  A       CCC            -   U   UCGGUCGGGGGAGAAUC 
       130       120       110       100         90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Cja-Mir-448_5p* (predicted)
mirBase accessionNone
Sequence 
0- AACAUCCUGCAUAGUGCUGCC -21
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Mature sequence

Cja-Mir-448_3p (predicted)
mirBase accessionNone
Sequence 
59- UUGCAUAUGUAGGAUGUCCC -79
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