MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-448

Family name MIR-448 (all species)
Seed UGCAUAU
Species Cow (Bos taurus)
MiRBase ID bta-mir-448
Paralogues
Orthologues Cfa-Mir-448  Cpo-Mir-448  Ete-Mir-448  Hsa-Mir-448  Mml-Mir-448  Mmu-Mir-448  Ocu-Mir-448  Rno-Mir-448 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037357.1: 63159366-63159445 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUAGCUAACCUUCACAUGGGCGGGGAGGUUGAACAUCCUGCAUAGUGCUGCCAGGAAAUCCCUAUUUUAUACUAAGGGGGGGUUGGCUGGUUGCAUAUGUAGGAUGUCCCAUCUCCCCACCCACAUCAUCAGGACAUAUA
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Structure
        10         20        30        40        50        60        70
GUAGCUAACCUUCACAU-|  C        UGA            G   U   AGGAAAUCCCUAUUUUA 
                  GGG GGGGAGGU   ACAUCCUGCAUA UGC GCC                 U
                  CCC CCCCUCUA   UGUAGGAUGUAU ACG UGG                 A
AUAUACAGGACUACUACA^  A        CCC            -   U   UCGGUUGGGGGGGAAUC 
.       130       120       110       100         90        80
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-448_5p* (predicted)

mirBase accessionNone
Sequence
0- GAACAUCCUGCAUAGUGCUGCC -22
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Mature sequence

Bta-Mir-448_3p

mirBase accessionMIMAT0009319
Sequence
60- UUGCAUAUGUAGGAUGUCCC -80
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Proposed targets TargetScanVert: bta-miR-448