MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-506-P3a

Family name MIR-506 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-508b
Paralogues Cfa-Mir-506-P1  Cfa-Mir-506-P2a  Cfa-Mir-506-P2b  Cfa-Mir-506-P3b  Cfa-Mir-506-P4b 
Orthologues Bta-Mir-506-P3  Cja-Mir-506-P3  Dno-Mir-506-P3  Eca-Mir-506-P3  Hsa-Mir-506-P3  Laf-Mir-506  Mml-Mir-506-P3  Mmr-Mir-506-P3  Ocu-Mir-506-P3  Pab-Mir-506-P3 
Node of Origin (locus) C. familiaris
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 115658609-115658666 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P3a)		 Mir-506-P4b chrX: 115652425-115652482 [-] UCSC Ensembl
Mir-506-P2b chrX: 115652721-115652779 [-] UCSC Ensembl
Mir-506-P3b chrX: 115658398-115658456 [-] UCSC Ensembl
Mir-506-P3a chrX: 115658609-115658666 [-] UCSC Ensembl
Mir-506-P2a chrX: 115665393-115665450 [-] UCSC Ensembl
Mir-506-P1 chrX: 115688019-115688076 [-] UCSC Ensembl
Seed CUGUCAC
Precursor
(pre-Mir +30nt flank)		 
GGCCACCACCUUCAGCUGAGUGUAGUGCUCUACUUGAGAGGGUGACAUUCACAGAUACUGGACAUGACUGUCACCUUUUUUGAGUACAGUAAUGCACAUUUUAUACAAUCUAUAUGGU
Get precursor sequence
Structure
        10          20        30         40        50        
GGCCACCACCUUCAGCUGA--     G    C    UG -|         U   CAGAUA 
                     GUGUA UGCU UACU  A GAGGGUGACA UCA      \
                     CACGU AUGA AUGA  U UUUCCACUGU AGU      C
UGGUAUAUCUAACAUAUUUUA     A    C    GU U^         C   ACAGGU 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-506-P3a_5p*
mirBase accessionNone
Sequence 
0- UACUUGAGAGGGUGACAUUCA -21
Get sequence
Mature sequence

Cfa-Mir-506-P3a_3p
mirBase accessionMIMAT0034425
Sequence 
36- ACUGUCACCUUUUUUGAGUACA -58
Get sequence
Proposed targets TargetScanVert: cfa-miR-508b
miRDB: MIMAT0034425