MirGeneDB 2.1
MirGeneDB ID

Bta-Mir-193-P1b

Family name MIR-193 (all species)
Seed GGGUCUU
Species Cow (Bos taurus)
MiRBase ID bta-mir-193a
Paralogues Bta-Mir-193-P1a  Bta-Mir-193-P2a  Bta-Mir-193-P2b 
Orthologues Aae-Mir-193-P1  Aca-Mir-193-P1b  Ami-Mir-193-P1b  Bge-Mir-193-P1  Cbr-Mir-193-P1-v1  Cbr-Mir-193-P1-v2  Cel-Mir-193-P1-v1  Cel-Mir-193-P1-v2  Cfa-Mir-193-P1b  Cgi-Mir-193-P1  Cmi-Mir-193-P1b  Cpi-Mir-193-P1b  Cpo-Mir-193-P1b  Cte-Mir-193-P1  Dan-Mir-193-P1-v1  Dan-Mir-193-P1-v2  Dan-Mir-193-P1-v3  Dan-Mir-193-P1-v4  Dma-Mir-193-P1  Dme-Mir-193-P1-v1  Dme-Mir-193-P1-v2  Dme-Mir-193-P1-v3  Dme-Mir-193-P1-v4  Dmo-Mir-193-P1-v1  Dmo-Mir-193-P1-v2  Dmo-Mir-193-P1-v3  Dmo-Mir-193-P1-v4  Dno-Mir-193-P1b  Dpu-Mir-193-P1  Dre-Mir-193-P1b1  Dre-Mir-193-P1b2  Dsi-Mir-193-P1-v1  Dsi-Mir-193-P1-v2  Dsi-Mir-193-P1-v3  Dsi-Mir-193-P1-v4  Dya-Mir-193-P1-v1  Dya-Mir-193-P1-v2  Dya-Mir-193-P1-v3  Dya-Mir-193-P1-v4  Esc-Mir-193-P1  Ete-Mir-193-P1b  Gga-Mir-193-P1b  Gja-Mir-193-P1b  Gmo-Mir-193-P1b2  Hme-Mir-193-P1  Hsa-Mir-193-P1b  Isc-Mir-193-P1  Lch-Mir-193-P1b  Lgi-Mir-193-P1  Loc-Mir-193-P1b  Loc-Mir-193-P1b-as  Mal-Mir-193-P1b2  Mdo-Mir-193-P1b  Mml-Mir-193-P1b  Mmu-Mir-193-P1b  Mun-Mir-193-P1b  Npo-Mir-193-P1  Oan-Mir-193-P1b  Obi-Mir-193-P1  Ocu-Mir-193-P1b  Ovu-Mir-193-P1  Pbv-Mir-193-P1b  Pma-Mir-193-P1  Pmi-Mir-193-P1  Rno-Mir-193-P1b  Sha-Mir-193-P1b  Spt-Mir-193-P1b  Sto-Mir-193-P1b  Tca-Mir-193-P1  Tgu-Mir-193-P1b  Tni-Mir-193-P1b2  Xbo-Mir-193-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037346.1: 18474472-18474527 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-193-P1b)		 Mir-193-P2b NC_037346.1: 18461524-18461584 [-] UCSC Ensembl
Mir-193-P1b NC_037346.1: 18474472-18474527 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUAAUCCGAGACGCGUGGGAGCUGAGAGCUGGGUCUUUGCGGGCGAGAUGAAGGUGUCGGUUCAACUGGCCUACAAAGUCCCAGUCCUCGGCCCCCAGGACCGACGGCUCCUCCU
Get precursor sequence
Structure
        10          20        30        40        50       
CCUAAUCCGAGACGCGU--|  A      AG     U     CG   G  A   AGGU 
                   GGG GCUGAG  CUGGG CUUUG  GGC AG UGA    G
                   CCC CGGCUC  GACCC GAAAC  CCG UC ACU    U
UCCUCCUCGGCAGCCAGGA^  C      CU     U     AU   G  A   UGGC 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-193-P1b_5p
mirBase accessionMIMAT0003794
Sequence 
0- UGGGUCUUUGCGGGCGAGAUGA -22
Get sequence
Proposed targets TargetScanVert: bta-miR-193a-5p
Co-mature sequence

Bta-Mir-193-P1b_3p
mirBase accessionMIMAT0003795
Sequence 
34- AACUGGCCUACAAAGUCCCAGU -56
Get sequence
Proposed targets TargetScanVert: bta-miR-193a-3p