MirGeneDB 2.1
MirGeneDB ID

Bfl-Mir-133-v1

Family name MIR-133 (all species)
Seed UUGGUCC
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID bfl-mir-133
Paralogues Bfl-Mir-133-v2 
Orthologues Aae-Mir-133  Asu-Mir-133  Bge-Mir-133  Bla-Mir-133-v1  Cbr-Mir-133  Cel-Mir-133  Cgi-Mir-133  Cin-Mir-133  Cte-Mir-133  Dan-Mir-133  Dma-Mir-133  Dme-Mir-133  Dmo-Mir-133  Dpu-Mir-133  Dsi-Mir-133  Dya-Mir-133  Efe-Mir-133  Esc-Mir-133  Hme-Mir-133  Isc-Mir-133  Lan-Mir-133  Lgi-Mir-133  Obi-Mir-133  Ovu-Mir-133  Pfl-Mir-133-v1  Sko-Mir-133-v1  Spu-Mir-133  Tca-Mir-133  Xbo-Mir-133 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 538437112_AFPZ209224: 434-493 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-133-v1)		 Mir-133-v1 538437112_AFPZ209224: 434-493 [+] UCSC
Mir-133-v2 538437112_AFPZ209224: 434-493 [+] UCSC
Precursor
(pre-Mir +30nt flank)
ACUUGCCAAGUAUCAGGGAUGCUGUGCUAAAGCUGGUACAUUGGAACCAAAUCAACUCCUCAAUGGAUUUGGUCCCCUUCAACCAGCUGUAGCAUUGCACUUUUCAAGCGCACAUUCAUC
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Structure
        10          20        30        40        50         
ACUUGCCAAGUAUCAGGGA--|  U      A       ACAUU  A        AACUC 
                     UGC GUGCUA AGCUGGU     GG ACCAAAUC     C
                     ACG UACGAU UCGACCA     CC UGGUUUAG     U
CUACUUACACGCGAACUUUUC^  U      G       ACUUC  C        GUAAC 
.       110       100        90        80        70        60
Deep sequencing
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CommentNot in assembly but in trace archive.
3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Bfl-Mir-133-v1_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGCUGGUACAUUGGAACCAAAUC -23
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Mature sequence

Bfl-Mir-133-v1_3p
mirBase accessionMIMAT0009484
Sequence 
37- UUUGGUCCCCUUCAACCAGCUGU -60
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