MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-223

Family name MIR-223 (all species)
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-223
Paralogues
Orthologues Ami-Mir-223  Bta-Mir-223  Cfa-Mir-223  Cja-Mir-223  Cli-Mir-223  Cmi-Mir-223  Cpi-Mir-223  Cpo-Mir-223  Dno-Mir-223  Dre-Mir-223  Ebu-Mir-223  Eca-Mir-223  Ete-Mir-223  Gga-Mir-223  Gja-Mir-223  Gmo-Mir-223  Hsa-Mir-223-v1  Laf-Mir-223  Lch-Mir-223  Loc-Mir-223  Mal-Mir-223  Mdo-Mir-223  Mml-Mir-223  Mmr-Mir-223  Mmu-Mir-223  Mun-Mir-223  Neu-Mir-223  Oan-Mir-223  Ocu-Mir-223  Pab-Mir-223  Pbv-Mir-223  Pma-Mir-223  Rno-Mir-223  Sha-Mir-223  Spt-Mir-223  Sto-Mir-223  Tgu-Mir-223  Tni-Mir-223  Xla-Mir-223  Xtr-Mir-223 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 GL343465.1: 618374-618439 [+] UCSC Ensembl
Seed GUCAGUU
Precursor
(pre-Mir +30nt flank)		 
CUACGAACGGACGCACGCAGGGCUUCCCUCCGUGUAUUUGACGAUCUGAUCGCACACUCCGUCUGCACCAGAGUGUCAGUUUGUCAAAUAUACAAAGGGCGGCCUCUGACCCGCCACAAGGACCCG
Get precursor sequence
Structure
        10         20         30        40        50        60   
CUACGAACGGACGCACG-   -|   U    CC             U    U   ACACUCCGU 
                  CAG GGCU CCCU  GUGUAUUUGACGA CUGA CGC         \
                  GUC CCGG GGGA  CAUAUAAACUGUU GACU GUG         C
GCCCAGGAACACCGCCCA   U^   C    AA             U    -   AGACCACGU 
    120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Sk Ta Ta To Wh
Star sequence

Aca-Mir-223_5p*
mirBase accessionMIMAT0021893
Sequence 
0- CGUGUAUUUGACGAUCUGAUCGC -23
Get sequence
Mature sequence

Aca-Mir-223_3p
mirBase accessionMIMAT0021894
Sequence 
43- UGUCAGUUUGUCAAAUAUACAAA -66
Get sequence