MirGeneDB 3.0
17 Xenopus laevis microRNA genes with seed GAGGUAG (all species)
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Eg Em Em He Ki Re St St
Xla-Let-7-P1b3 xla-let-7a LET-7 GAGGUAG MIMAT0046395 MIMAT0046396 NC_030736.1 115937612 115937678 - X. laevis Bilateria No 1
Xla-Let-7-P1b4 None LET-7 GAGGUAG None None NW_016694862.1 495934 496000 + X. laevis Bilateria No 1
Xla-Let-7-P1c3 None LET-7 GAGGUAG None None NC_030727.1 9126439 9126505 - X. laevis Bilateria No 1
Xla-Let-7-P1c4 xla-let-7c LET-7 GAGGUAG MIMAT0046399 MIMAT0046400 NC_030727.1 9126439 9126505 - X. laevis Bilateria No 1
Xla-Let-7-P2a1c None LET-7 GAGGUAG None None NW_016694815.1 3068635 3068706 - X. laevis Bilateria Yes 1
Xla-Let-7-P2a1d None LET-7 GAGGUAG None None NW_016694823.1 891780 891851 - X. laevis Bilateria Unknown 1
Xla-Let-7-P2a2c None LET-7 GAGGUAG None None NC_030728.1 2407440 2407509 - X. laevis Bilateria Yes 1
Xla-Let-7-P2a2d xla-let-7e LET-7 GAGGUAG MIMAT0046401 MIMAT0046402 NC_030729.1 1729619 1729688 - X. laevis Bilateria Yes 1
Xla-Let-7-P2a3d xla-let-7f LET-7 GAGGUAG MIMAT0046403 MIMAT0046404 NC_030739.1 36826128 36826198 - X. laevis Bilateria Unknown 1
Xla-Let-7-P2b2c None LET-7 GAGGUAG None None NC_030728.1 2407125 2407202 - X. laevis Bilateria Yes
Xla-Let-7-P2b2d None LET-7 GAGGUAG None None NC_030729.1 1729272 1729349 - X. laevis Bilateria Yes
Xla-Let-7-P2b3c None LET-7 GAGGUAG None None NW_016763985.1 126 203 - X. laevis Bilateria Yes 1 1
Xla-Let-7-P2b3d xla-mir-98 LET-7 GAGGUAG MIMAT0046617 MIMAT0046618 NC_030739.1 36825865 36825942 - X. laevis Bilateria Yes 1 1
Xla-Let-7-P2c2 xla-let-7i LET-7 GAGGUAG MIMAT0046407 MIMAT0046408 NC_030729.1 93374292 93374368 + Gnathostomata Bilateria Yes 1
Xla-Let-7-P2c3c None LET-7 GAGGUAG None None NC_030730.1 122075909 122075986 + X. laevis Bilateria Yes 1
Xla-Let-7-P2c3d None LET-7 GAGGUAG None None NC_030731.1 100802886 100802963 + X. laevis Bilateria Yes
Xla-Let-7-P2c4 xla-let-7b LET-7 GAGGUAG MIMAT0046397 MIMAT0046398 NC_030726.1 71792735 71792808 - Gnathostomata Bilateria Yes 1

(red - mature/co-mature, blue - star)

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