MirGeneDB 2.1

11 Latimeria chalumnae microRNA genes with seed AGUGCAA (all species)
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Lch-Mir-130-P1a None MIR-130 AGUGCAA None None JH126620.1 806769 806827 - Gnathostomata Vertebrata Unknown 1
Lch-Mir-130-P1b None MIR-130 AGUGCAA None None JH126567.1 194546 194608 - Gnathostomata Vertebrata Unknown
Lch-Mir-130-P1c None MIR-130 AGUGCAA None None JH130223.1 57005 57064 + Gnathostomata Vertebrata Unknown
Lch-Mir-130-P1d None MIR-130 AGUGCAA None None JH128272.1 328151 328212 - Gnathostomata Vertebrata Unknown 1
Lch-Mir-130-P2a None MIR-130 AGUGCAA None None JH126620.1 804317 804379 - Gnathostomata Vertebrata Unknown 1 1
Lch-Mir-130-P2b None MIR-130 AGUGCAA None None JH126567.1 194120 194181 - Gnathostomata Vertebrata Unknown 1 1 1
Lch-Mir-130-P2d None MIR-130 AGUGCAA None None JH128272.1 320519 320582 - Gnathostomata Vertebrata Unknown 1
Lch-Mir-130-P3a None MIR-130 AGUGCAA None None JH126620.1 795127 795190 - Gnathostomata Vertebrata Unknown 1
Lch-Mir-130-P3b None MIR-130 AGUGCAA None None JH126567.1 190727 190791 - Gnathostomata Vertebrata Unknown 1
Lch-Mir-130-P3c None MIR-130 AGUGCAA None None JH130223.1 57514 57577 + Gnathostomata Vertebrata Unknown 1
Lch-Mir-130-P4a None MIR-130 AGUGCAA None None JH126620.1 792824 792880 - Gnathostomata Vertebrata Unknown 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix