MirGeneDB 3.0

22 microRNA genes with node of origin H. rufescens
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Hru-Mir-2-o51 None MIR-2 AUCACAG None None JALGQA010000019.1 17033823 17033880 + H. rufescens Protostomia No 1
Hru-Mir-2-o52 None MIR-2 AUCACAG None None JALGQA010000019.1 17033972 17034029 + H. rufescens Protostomia No 1 1
Hru-Mir-2-o53 None MIR-2 AUCACAG None None JALGQA010000019.1 17034102 17034159 + H. rufescens Protostomia No 1
Hru-Mir-2-o54 None MIR-2 AUCACAG None None JALGQA010000019.1 17034273 17034331 + H. rufescens Protostomia No 1 1
Hru-Mir-2-o55 None MIR-2 CACAGCC None None JALGQA010000019.1 17033087 17033148 + H. rufescens Protostomia No
Hru-Mir-92-o92 None MIR-92 AUUGCAC None None JALGQA010000014.1 5911876 5911932 + H. rufescens Bilateria No 1
Hru-Mir-92-o93 None MIR-92 AUUGCAC None None JALGQA010000014.1 5912798 5912858 + H. rufescens Bilateria No 1
Hru-Mir-92-o94 None MIR-92 AUUGCAC None None JALGQA010000014.1 5917110 5917167 + H. rufescens Bilateria No 1 1
Hru-Mir-92-o95 None MIR-92 AUUGCAC None None JALGQA010000014.1 5919490 5919546 + H. rufescens Bilateria No 1
Hru-Mir-184-o5 None MIR-184 GGACGGA None None JALGQA010000014.1 18032507 18032564 - H. rufescens Nephrozoa No 1 1
Hru-Mir-184-o6 None MIR-184 GGACGGA None None JALGQA010000014.1 18030619 18030676 - H. rufescens Nephrozoa No 1 1
Hru-Mir-210-P23 None MIR-210 UGUGCGU None None JALGQA010000006.1 28697465 28697524 + H. rufescens Bilateria No 1
Hru-Mir-210-P24 None MIR-210 UGUGCGU None None JALGQA010000006.1 28646002 28646060 + H. rufescens Bilateria No 1
Hru-Mir-242-P3a None MIR-242 UGCGUAG None None JALGQA010000016.1 16932597 16932652 - H. rufescens Nephrozoa Unknown 1 1 1
Hru-Mir-242-P3b None MIR-242 UGCGUAG None None JALGQA010000016.1 16931077 16931132 - H. rufescens Nephrozoa Unknown 1 1 1
Hru-Mir-1986-P1 None MIR-1986 GGAUUUC None None JALGQA010000006.1 52828715 52828771 - H. rufescens Lophotrochozoa No 1
Hru-Mir-1986-P2 None MIR-1986 GGAUUUC None None JALGQA010000006.1 52827721 52827778 - H. rufescens Lophotrochozoa No 1
Hru-Mir-1989-P4a None MIR-1989 CAGCUGU None None JALGQA010000006.1 51473548 51473604 - H. rufescens Platytrochozoa Unknown 1 1
Hru-Mir-1989-P4b None MIR-1989 CAGCUGU None None JALGQA010000006.1 51636455 51636511 - H. rufescens Platytrochozoa Unknown 1 1
Hru-Novel-1 None HRU-NOVEL-1 UUUUUAC None None JALGQA010000055.1 1701472 1701529 - H. rufescens H. rufescens No 1
Hru-Novel-2 None HRU-NOVEL-2 ACUCCCG None None gb|JALGQB010000024.1|:6030563-6030826 91 144 + H. rufescens H. rufescens Unknown 1
Hru-Novel-3 None HRU-NOVEL-3 GGUCAGU None None JALGQA010000021.1 12337555 12337613 - H. rufescens H. rufescens Unknown 1

(red - mature/co-mature, blue - star)

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