MirGeneDB 3.0

16 microRNA genes with seed GUGACAG
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Rno-Mir-542-P1c rno-mir-542-2 MIR-542 GUGACAG MIMAT0003178 MIMAT0003179 chrX 158152156 158152216 + R. norvegicus Eutheria No 1
Rno-Mir-542-P1b rno-mir-542-3 MIR-542 GUGACAG MIMAT0003178 MIMAT0003179 chrX 158158895 158158955 + R. norvegicus Eutheria No 1
Rno-Mir-542-P1a rno-mir-542-1 MIR-542 GUGACAG MIMAT0003178 MIMAT0003179 chrX 158588539 158588599 + R. norvegicus Eutheria No 1
Ocu-Mir-542 V ocu-mir-542 MIR-542 GUGACAG MIMAT0048525 MIMAT0048526 chrX 108850875 108850933 - Eutheria Eutheria 2 No 1
Mmr-Mir-542 V mmr-mir-542 MIR-542 GUGACAG None MIMAT0049224 CM007693.1 64871640 64871698 - Eutheria Eutheria 2 No 1
Mml-Mir-542 V mml-mir-542 MIR-542 GUGACAG MIMAT0006406 MIMAT0006407 CM014356.1 130805265 130805323 - Eutheria Eutheria 2 No 1
Hsa-Mir-542 V hsa-mir-542 MIR-542 GUGACAG MIMAT0003340 MIMAT0003389 chrX 134541364 134541422 - Eutheria Eutheria 2 No 1
Eca-Mir-542 V eca-mir-542 MIR-542 GUGACAG MIMAT0013237 MIMAT0013238 CM009179.1 111016323 111016381 - Eutheria Eutheria 1 No 1
Dno-Mir-542 V dno-mir-542 MIR-542 GUGACAG MIMAT0047969 MIMAT0047970 JH573198 468016 468075 + Eutheria Eutheria 2 No 1
Cfa-Mir-542 V cfa-mir-542 MIR-542 GUGACAG None MIMAT0006747 chrX 105178359 105178417 - Eutheria Eutheria 2 No 1
Pab-Mir-542 None MIR-542 GUGACAG None None CM054702.2 140562939 140562997 - Eutheria Eutheria No 1
Mmu-Mir-542 mmu-mir-542 MIR-542 GUGACAG MIMAT0003171 MIMAT0003172 chrX 53049414 53049474 - Eutheria Eutheria No 1
Laf-Mir-542 None MIR-542 GUGACAG None None GL010127.1 4458476 4458534 - Eutheria Eutheria Unknown 1
Ete-Mir-542 None MIR-542 GUGACAG None None JH980394 620285 620341 + Eutheria Eutheria Unknown
Cpo-Mir-542 cpo-mir-542 MIR-542 GUGACAG MIMAT0047341 MIMAT0047342 scaffold_128 2874159 2874217 - Eutheria Eutheria No 1
Bta-Mir-542 bta-mir-542 MIR-542 GUGACAG MIMAT0013594 None NC_037357.1 18237457 18237515 - Eutheria Eutheria No 1

(red - mature/co-mature, blue - star)

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