MirGeneDB ID | Sha-Mir-7303-P1-v1 |
Family name |
MIR-7303 (all species) |
Seed |
UAUGCGU |
Species |
Tasmanian devil (Sarcophilus harrisii) |
MiRBase ID |
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Paralogues |
Sha-Mir-7303-P1-v2
Sha-Mir-7303-P2
|
Orthologues |
Mdo-Mir-7303-P1-v1
Mdo-Mir-7303-P1-v2
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
|
Genome context (DEVIL_add) |
GL849772.1: 44547-44605 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUUGGGGAGCAGACGGGGUCCAGCCCAGCUUCAUCCAAACAGGACGCAUUGUCCCAUAUGACCAGGAUAUGCGUCCUCUUUGGAUAUUGUUGGGCGAGAACUGAUCGCAGCAGCGGGGU
Get precursor sequence
|
Structure | 10 20 30 40 50
CUUGGGGAGCAGACGGGG--| CA UUC C U CCAUA
UC GCCCAGC AUCCAAA AGGACGCAU GUC U
AG CGGGUUG UAGGUUU UCCUGCGUA UAG G
UGGGGCGACGACGCUAGUCA^ AG UUA C - GACCA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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Star sequence |
Sha-Mir-7303-P1-v1_5p* |
mirBase accession | None |
Sequence |
0- UCAUCCAAACAGGACGCAUUGUC -23
Get sequence
|
Mature sequence |
Sha-Mir-7303-P1-v1_3p |
mirBase accession | None |
Sequence |
36- AUAUGCGUCCUCUUUGGAUAUUG -59
Get sequence
|