MirGeneDB 2.1
MirGeneDB ID

Pfl-Mir-10-P3l

Family name MIR-10 (all species)
Seed CCCUGAG
Species Ptychodera (Ptychodera flava)
MiRBase ID
Paralogues Pfl-Mir-10-P1  Pfl-Mir-10-P2  Pfl-Mir-10-P3j1  Pfl-Mir-10-P3j2  Pfl-Mir-10-P3k 
Orthologues Aae-Mir-10-P3  Asu-Mir-10-P3  Bfl-Mir-10-P3  Bge-Mir-10-P3  Bla-Mir-10-P3  Bpl-Mir-10-P3  Cgi-Mir-10-P3  Cin-Mir-10-P3  Cte-Mir-10-P3  Dan-Mir-10-P3  Dma-Mir-10-P3  Dme-Mir-10-P3  Dmo-Mir-10-P3  Dpu-Mir-10-P3  Dsi-Mir-10-P3  Dya-Mir-10-P3  Esc-Mir-10-P3  Isc-Mir-10-P3  Lan-Mir-10-P3  Lgi-Mir-10-P3  Nve-Mir-10  Obi-Mir-10-P3  Ovu-Mir-10-P3  Pmi-Mir-10-P3  Sko-Mir-10-P3  Spu-Mir-10-P3  Tca-Mir-10-P3  Xbo-Mir-10-P3 
Node of Origin (locus) P. flava
Node of Origin (family) Eumetazoa
Genome context
(Pfl)		 LD344132.1: 17799-17857 [+]
Precursor
(pre-Mir +30nt flank)
ACCCACGAUACCGUUCAGUGCGCUUCUCGAUCCCUGAGACCCUAACUUUGGAUGUCAACUAUAAUUCACAGGCUAGUUGCUCAGGUACUGGGUGGCAUAUAUGAGCUGCAGGAAGCUUC
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Structure
        10        20          30        40         50        
ACCCACGAUACCGUUCAGUGC--   U    AUC      ACC   A-| U    UGUCA 
                       GCU CUCG   CCUGAG   CUA  CU UGGA     A
                       CGG GGGU   GGACUC   GAU  GA ACUU     C
CUUCGAAGGACGUCGAGUAUAUA   U    CAU      GUU   CG^ C    AAUAU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Pfl-Mir-10-P3l_5p (predicted)
mirBase accessionNone
Sequence 
0- UCCCUGAGACCCUAACUUUGGA -22
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Star sequence

Pfl-Mir-10-P3l_3p* (predicted)
mirBase accessionNone
Sequence 
37- ACAGGCUAGUUGCUCAGGUACU -59
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