MirGeneDB 3.0
MirGeneDB ID

Pca-Mir-2-o141

Family name MIR-2 (all species)
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues Pca-Mir-2-o139  Pca-Mir-2-o140  Pca-Mir-2-o142  Pca-Mir-2-o143  Pca-Mir-2-o144  Pca-Mir-2-o145  Pca-Mir-2-o146  Pca-Mir-2-o147  Pca-Mir-2-o148  Pca-Mir-2-o149  Pca-Mir-2-o150  Pca-Mir-2-o151  Pca-Mir-2-o152 
Orthologues Ava-Mir-2-o141a  Ava-Mir-2-o141b  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) P. caudatus
Node of Origin (family) Protostomia
Genome context
(Priapulus_caudatus_gca000485595v2)		 KQ715494.1: 124073-124133 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2-o141)		 Mir-2-o141 KQ715494.1: 124073-124133 [-] UCSC Ensembl
Mir-2-o140 KQ715494.1: 124356-124415 [-] UCSC Ensembl
Mir-2-o139 KQ715494.1: 124532-124588 [-] UCSC Ensembl
Mir-71 KQ715494.1: 125079-125139 [-] UCSC Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
AAGGUGUUGUUGGACCACAGAGGGUUGCUUCCAUCAAAGUGGCUUUGAUGUGUUGUUUUUUGGUUUCAUAUCACAGCCAGCUUUGAUGAGUGCAUCCCAUAGCAAUUCAUCUCCAGUGCAU
Get precursor sequence
Structure
        10        20          30         40        50         
AAGGUGUUGUUGGACCACAGA--   U   UUC        -|    U       UUGUUU 
                       GGG UGC   CAUCAAAG UGGCU UGAUGUG      U
                       CCC ACG   GUAGUUUC ACCGA ACUAUAC      U
UACGUGACCUCUACUUAACGAUA   U   UGA        G^    C       UUUGGU 
 .       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Gi In To
Star sequence

Pca-Mir-2-o141_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCAUCAAAGUGGCUUUGAUGUG -22
Get sequence
Mature sequence

Pca-Mir-2-o141_3p
mirBase accessionNone
Sequence 
38- UAUCACAGCCAGCUUUGAUGAGU -61
Get sequence