MirGeneDB 3.0
MirGeneDB ID

Pca-Mir-2-o143

Family name MIR-2 (all species)
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues Pca-Mir-2-o139  Pca-Mir-2-o140  Pca-Mir-2-o141  Pca-Mir-2-o142  Pca-Mir-2-o144  Pca-Mir-2-o145  Pca-Mir-2-o146  Pca-Mir-2-o147  Pca-Mir-2-o148  Pca-Mir-2-o149  Pca-Mir-2-o150  Pca-Mir-2-o151  Pca-Mir-2-o152 
Orthologues Gsp-Mir-2  Ple-Mir-2  Tur-Mir-2-o143 
Node of Origin (locus) P. caudatus
Node of Origin (family) Protostomia
Genome context
(Priapulus_caudatus_gca000485595v2)		 KQ715271.1: 34696-34756 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2-o143)		 Mir-2-o145 KQ715271.1: 32509-32573 [-] UCSC Ensembl
Mir-2-o144 KQ715271.1: 34504-34565 [-] UCSC Ensembl
Mir-2-o143 KQ715271.1: 34696-34756 [-] UCSC Ensembl
Mir-2-o142 KQ715271.1: 34836-34894 [-] UCSC Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
UGUGGACGAUGUUUUAACGGAACGGUCUGUAUCGCUAGAGUUGCUGUGAUUUGUUGAUUUCACAUUCAUAUCACAGGCUCUUUGGUGAUGCAGAGCGAUUCUAAUGCUCUUCGUGUGAUCG
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Structure
        10         20         30        40        50          
UGUGGACGAUGUUUUAAC-    -| G               UUG       U  UUGAUU 
                   GGAA CG UCUGUAUCGCUAGAG   CUGUGAU UG      \
                   UCUU GC AGACGUAGUGGUUUC   GACACUA AC      U
GCUAGUGUGCUUCUCGUAA    A^ G               UCG       U  UUACAC 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Gi In To
Star sequence

Pca-Mir-2-o143_5p*
mirBase accessionNone
Sequence 
0- AUCGCUAGAGUUGCUGUGAUUUG -23
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Mature sequence

Pca-Mir-2-o143_3p
mirBase accessionNone
Sequence 
38- UAUCACAGGCUCUUUGGUGAUGC -61
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