MirGeneDB 3.0
MirGeneDB ID

Pca-Mir-2-o140

Family name MIR-2 (all species)
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues Pca-Mir-2-o139  Pca-Mir-2-o141  Pca-Mir-2-o142  Pca-Mir-2-o143  Pca-Mir-2-o144  Pca-Mir-2-o145  Pca-Mir-2-o146  Pca-Mir-2-o147  Pca-Mir-2-o148  Pca-Mir-2-o149  Pca-Mir-2-o150  Pca-Mir-2-o151  Pca-Mir-2-o152 
Orthologues Ava-Mir-2-o140a  Ava-Mir-2-o140b  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) P. caudatus
Node of Origin (family) Protostomia
Genome context
(Priapulus_caudatus_gca000485595v2)		 KQ715494.1: 124356-124415 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2-o140)		 Mir-2-o141 KQ715494.1: 124073-124133 [-] UCSC Ensembl
Mir-2-o140 KQ715494.1: 124356-124415 [-] UCSC Ensembl
Mir-2-o139 KQ715494.1: 124532-124588 [-] UCSC Ensembl
Mir-71 KQ715494.1: 125079-125139 [-] UCSC Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
UGGGAUGAAUGCGAUCGCUUGCAGGCCAGCCAGUCAAAGUGGUUGUGACAUGGUGUGUUAAGAUGCAUAUCACAGCCAGCUUUGAUGAGUUGGCUUUCUCUGUCAUCAUCAGAACCUCAC
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Structure
        10        20          30         40        50         
UGGGAUGAAUGCGAUCGCUUGC--        CA       -|        C   GUGUGU 
                        AGGCCAGC  GUCAAAG UGGUUGUGA AUG      \
                        UUCGGUUG  UAGUUUC ACCGACACU UAC      U
CACUCCAAGACUACUACUGUCUCU        AG       G^        A   GUAGAA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Gi In To
Star sequence

Pca-Mir-2-o140_5p*
mirBase accessionNone
Sequence 
0- CAGUCAAAGUGGUUGUGACAUG -22
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Mature sequence

Pca-Mir-2-o140_3p
mirBase accessionNone
Sequence 
37- UAUCACAGCCAGCUUUGAUGAGU -60
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