MirGeneDB 3.0
MirGeneDB ID

Pca-Mir-2-o139

Family name MIR-2 (all species)
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues Pca-Mir-2-o140  Pca-Mir-2-o141  Pca-Mir-2-o142  Pca-Mir-2-o143  Pca-Mir-2-o144  Pca-Mir-2-o145  Pca-Mir-2-o146  Pca-Mir-2-o147  Pca-Mir-2-o148  Pca-Mir-2-o149  Pca-Mir-2-o150  Pca-Mir-2-o151  Pca-Mir-2-o152 
Orthologues Ava-Mir-2-o139a  Ava-Mir-2-o139b-v1  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) P. caudatus
Node of Origin (family) Protostomia
Genome context
(Priapulus_caudatus_gca000485595v2)		 KQ715494.1: 124532-124588 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2-o139)		 Mir-2-o141 KQ715494.1: 124073-124133 [-] UCSC Ensembl
Mir-2-o140 KQ715494.1: 124356-124415 [-] UCSC Ensembl
Mir-2-o139 KQ715494.1: 124532-124588 [-] UCSC Ensembl
Mir-71 KQ715494.1: 125079-125139 [-] UCSC Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
ACACGGUGGCACUAUUGCGUGGUAGCAGAUUCGUUAAAGUGUCUGUGAUGUGUUUGAGCUAUCAUAUCACAGCCAGCUUUGAUGAGACUGUGGCCCGAAUGUUCGCCUUGAACCCAC
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Structure
        10           20        30        40         50       
ACACGGUGGCACUAUUG---| U   A    A           GU-          UUUG 
                    CG GGU GCAG UUCGUUAAAGU   CUGUGAUGUG    A
                    GC CCG UGUC GAGUAGUUUCG   GACACUAUAC    G
CACCCAAGUUCCGCUUGUAA^ -   G    A           ACC          UAUC 
     110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Gi In To
Star sequence

Pca-Mir-2-o139_5p* (predicted)
mirBase accessionNone
Sequence 
0- UCGUUAAAGUGUCUGUGAUGUG -22
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Mature sequence

Pca-Mir-2-o139_3p
mirBase accessionNone
Sequence 
34- UAUCACAGCCAGCUUUGAUGAGA -57
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