MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-2-o141a

Family name MIR-2 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-2-o139a  Ava-Mir-2-o139b-v1  Ava-Mir-2-o140a  Ava-Mir-2-o140b  Ava-Mir-2-o141b 
Orthologues Gsp-Mir-2  Pca-Mir-2-o141  Ple-Mir-2 
Node of Origin (locus) A. vaga
Node of Origin (family) Protostomia
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075496.1: 4518982-4519044 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-o141a)		 Mir-2-o140a CP075496.1: 4518750-4518810 [+] Ensembl
Mir-2-o141a CP075496.1: 4518982-4519044 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
CCAAUAACAGAAAAAAAAGACGGUUUCUGUCGGUAAUCAGUCUGUGAAAUGUUCAGAUAAAAUCAAAAGUCAUAUCACAGCCUGCUUGCUGAUCUUCACCGUCGAUUACUUCCUAGCAUCAUA
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Structure
        10          20        30        40        50        60 
CCAAUAACAGAAAAAAAA--|     UUCU        U   U      A   UUCAGAUAA 
                    GACGGU    GUCGGUAA CAG CUGUGA AUG         \
                    CUGCCA    UAGUCGUU GUC GACACU UAC         A
AUACUACGAUCCUUCAUUAG^     CUUC        C   C      A   UGAAAACUA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
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Star sequence

Ava-Mir-2-o141a_5p*
mirBase accessionNone
Sequence 
0- CGGUAAUCAGUCUGUGAAAUG -21
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Mature sequence

Ava-Mir-2-o141a_3p
mirBase accessionNone
Sequence 
42- UAUCACAGCCUGCUUGCUGAU -63
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